hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-17035584/chunk_1/iprscan-20080809-17035584.nocrc
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Query sequence: fh13337
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00399                                                 136.2    3.5e-36   1
SM00430                                                 125.0    8.1e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00399    1/1      37   110 ..     1    72 []   136.2  3.5e-36
SM00430    1/1     207   365 ..     1   158 []   125.0  8.1e-33

Alignments of top-scoring domains:
SM00399: domain 1 of 1, from 37 to 110: score 136.2, E = 3.5e-36
                   *->sepCaVCgdpAsGyHfGvlsCrACkaFFRRtvvlkkk..YkCkknnn
                      +e C+VCgd+A+GyH+ +++C++Ck+FFRRt++++++++Y+Ck++  
     fh13337    37    DEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHptYSCKYDSC 83   

                   CeidkkgRnrCRaCRlkKClevGMnpe<-*
                   C+idk  Rn+C+ CR+kKC++vGM  +   
     fh13337    84 CVIDKITRNQCQLCRFKKCIAVGMAMD    110  

SM00430: domain 1 of 1, from 207 to 365: score 125.0, E = 8.1e-33
                   *->ewwerdllltvewaksfpfFreLsleDqiiLLksfwfelllLesayr
                      ++ + ++ ++v++ak++p F+eL+ eDqiiLLk++++e++ L+ a r
     fh13337   207    KIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVR 253  

                   sa.lkksdlllfpdgtyirpd...lf.pfldrildelv.plreLkltdeE
                   ++++ +  l l++     r++ ++++ +   + ++el ++l+  +l+d+E
     fh13337   254 YDpESD-TLTLSGEMAVKREQlknGGlGVVSDAIFELGkSLSAFNLDDTE 302  

                   yalLkaillfnpagpglseegqeiveklqeklsnaLhdYylknypmpnyp
                    alL a ll + ++ gl +  ++++ek qe ++ a  +Y+ ++ +  n+p
     fh13337   303 VALLQAVLLMSTDRSGLLC--VDKIEKSQEAYLLAFEHYVNHRKH--NIP 348  

                   sRfakLllllpslrkis<-*
                   + + kLl+++++lr i    
     fh13337   349 HFWPKLLMKVTDLRMIG    365  

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