hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-17215852/chunk_1/iprscan-20080809-17215852.nocrc
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Query sequence: fh13524
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00401                                                  69.5    4.2e-16   1
SM00717                                                  42.8    4.6e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00717    1/1      76   125 ..     1    53 []    42.8  4.6e-08
SM00401    1/1     179   233 ..     1    54 []    69.5  4.2e-16

Alignments of top-scoring domains:
SM00717: domain 1 of 1, from 76 to 125: score 42.8, E = 4.6e-08
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelp.gRtpkqcrer
                      + +eW++ E +l++ea++kyG    +d++ I + + + ++  +++e+
     fh13524    76    EMEEWSASEANLFEEALEKYG----KDFTDIQQDFLpWKSLTSIIEY 118  

                   wrnllkp<-*
                   +++++ +   
     fh13524   119 YYMWKTT    125  

SM00401: domain 1 of 1, from 179 to 233: score 69.5, E = 4.2e-16
                   *->kgsgrrCsnCgtttTplWRrgpsGn.qktLCNACGLyykkhgvkkrp
                       g+gr+C++C+tt++ +W++++ +n q+ LC +C+ y+kk+g++k+p
     fh13524   179    PGAGRACESCYTTQSYQWYSWGPPNmQCRLCASCWTYWKKYGGLKMP 225  

                   lslkkdgi<-*
                   ++l  +++   
     fh13524   226 TRLDGERP    233  

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