hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-14260676/chunk_1/iprscan-20090525-14260676.nocrc
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Query sequence: fh14138
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01237.9.fs Oxysterol-binding protein                  344.7   1.4e-100   2
PF01237.9.ls Oxysterol-binding protein                  333.2    4.2e-97   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01237.9.ls   1/1     108   541 ..     1   440 []   333.2  4.2e-97
PF01237.9.fs   1/2     131   382 ..    22   293 ..   299.0  8.2e-87
PF01237.9.fs   2/2     441   541 ..   336   440 .]    45.7  6.7e-13

Alignments of top-scoring domains:
PF01237.9.ls: domain 1 of 1, from 108 to 541: score 333.2, E = 4.2e-97
                   *->kSqhsSsssltsklkfilsepkdltrRldi..peeslspisLwsisq
                      +  h  s+  +  +  +ls +++  r +++++p +s+   s wsi++
     fh14138   108    SRKHRMSEEKDCGGGDALSNGIKKHR-TSLpsPMFSRNDFSIWSILR 153  

                   lwvGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWf
                   +++G +Lskit+Pv +nEp+S Lqr+te +e   l  kA +  d+++r +
     fh14138   154 KCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVER-M 202  

                   lyvaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrllsE
                     vaa+ +s  ++   r+ KP+NPlLGEt el r++    +   +rl+sE
     fh14138   203 QCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDD---LG---FRLISE 246  

                   QVSHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtil
                   QVSHHPP+sAf+ae ++++  + g + +k kF+Gks ++ + G+ + + l
     fh14138   247 QVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGT-ITLEL 295  

                   dikdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcvI
                     ++     E Ytwt P+  v++I+vGk+++E+ G++ +in++tGdkcv+
     fh14138   296 LEHN-----EAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVL 340  

                   eFktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKvq
                    Fk+ G f      ++g i  d ++     kkl +l GkW++  y  +  
     fh14138   341 NFKPCGLFGKELHKVEGYIQ-DKSK-----KKLCALYGKWTECLYSVDPA 384  

                   sksegelflDa.....hktphealkvrpLeeqhel...............
                           +Da ++++ k + e  +++ ++   el++ + +++++    +
     fh14138   385 T-------FDAykkndKKNTEEKKNSKQMSTSEELdempvpdsesvfiip 427  

                   ...esrkaWkkvadalkvgnltvftktkneleerqRpllkptesrgvedq
                   ++ + +++     ++   +n+t+f+  +ne++       ++t+ r+++d+
     fh14138   428 gsvLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDI 477  

                   ralfkrledkedldkeekkekpeaddkerkqkgslyepkwfvpsgqpvtd
                   ra+++++ d + ++k++ +ek++a+ k r    ++ ++ wf +   p + 
     fh14138   478 RAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYN- 526  

                   KeklyikarkeyWefrKk<-*
                        ++++++yW  +++   
     fh14138   527 -GAQDWIYSGSYW--DRN    541  

PF01237.9.fs: domain 1 of 2, from 131 to 382: score 299.0, E = 8.2e-87
                   *->kdltrRldipeeslspisLwsisqlwvGkdLskitlPvfinEpkSmL
                      k +t+ l  p +s+   s wsi+++++G +Lskit+Pv +nEp+S L
     fh14138   131    KHRTS-LPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFL 176  

                   qrvtedleYpelLdkAaaredsltrWflyvaastlssysettrrvkKPlN
                   qr+te +e   l  kA +  d+++r +  vaa+ +s  ++   r+ KP+N
     fh14138   177 QRLTEYMEHTYLIHKASSLSDPVER-MQCVAAFAVSAVASQWERTGKPFN 225  

                   PlLGEtFelkrendElpnkgqyrllsEQVSHHPPvsAffaespkskwrvq
                   PlLGEt el r++    +   +rl+sEQVSHHPP+sAf+ae ++++  + 
     fh14138   226 PLLGETYELVRDD---LG---FRLISEQVSHHPPISAFHAEGLNNDFIFH 269  

                   gevqikskFlGkslavmkeGltvhtildikdingkpEtYtwtqPnttveG
                   g + +k kF+Gks ++ + G+ + + l  ++     E Ytwt P+  v++
     fh14138   270 GSIYPKLKFWGKSVEAEPKGT-ITLELLEHN-----EAYTWTNPTCCVHN 313  

                   ILvGkpfvElSGdesvinsstGdkcvIeFktkGyfSGkkdsfkgrivkdp
                   I+vGk+++E+ G++ +in++tGdkcv+ Fk+ G f      ++g i  d 
     fh14138   314 IIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQ-DK 362  

                   dgnkdKEkklytlsGkWndsmyikK<-*
                   ++     kkl +l GkW++  y  +   
     fh14138   363 SK-----KKLCALYGKWTECLYSVD    382  

PF01237.9.fs: domain 2 of 2, from 441 to 541: score 45.7, E = 6.7e-13
                   *->dalkvgnltvftktkneleerqRpllkptesrgvedqralfkrledk
                      ++   +n+t+f+  +ne++       ++t+ r+++d+ra+++++ d 
     fh14138   441    NSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQ 487  

                   edldkeekkekpeaddkerkqkgslyepkwfvpsgqpvtdKeklyikark
                   + ++k++ +ek++a+ k r    ++ ++ wf +   p +      +++++
     fh14138   488 ASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYN--GAQDWIYSG 535  

                   eyWefrKk<-*
                   +yW  +++   
     fh14138   536 SYW--DRN    541  

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