# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh14412.fasta.nr -Q fh14412.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh14412, 403 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6790097 sequences Expectation_n fit: rho(ln(x))= 5.0583+/-0.000188; mu= 11.5787+/- 0.011 mean_var=89.9884+/-19.183, 0's: 36 Z-trim: 249 B-trim: 4404 in 2/65 Lambda= 0.135201 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087258|dbj|BAD92076.1| ATP-binding cassette, ( 403) 2679 532.5 5.5e-149 gi|119579398|gb|EAW58994.1| ATP-binding cassette, (2261) 2557 509.5 2.6e-141 gi|13876613|gb|AAK43526.1|AF287262_1 ATP-binding c (2261) 2557 509.5 2.6e-141 gi|187955036|gb|AAI46857.1| ATP-binding cassette, (2261) 2557 509.5 2.6e-141 gi|13123945|sp|O95477|ABCA1_HUMAN ATP-binding cass (2261) 2557 509.5 2.6e-141 gi|9755159|gb|AAF98175.1|AF285167_1 ATP-binding ca (2261) 2557 509.5 2.6e-141 gi|15212107|dbj|BAB63210.1| ABCA1 [Homo sapiens] (2261) 2557 509.5 2.6e-141 gi|5734101|gb|AAD49849.1|AF165281_1 ATP cassette b (2201) 2554 508.9 3.9e-141 gi|114625982|ref|XP_520163.2| PREDICTED: ATP-bindi (2254) 2551 508.3 5.9e-141 gi|114625980|ref|XP_001138040.1| PREDICTED: ATP-bi (2261) 2551 508.3 5.9e-141 gi|9247086|gb|AAF86276.1|AF275948_1 ABCA1 [Homo sa (2261) 2550 508.1 6.7e-141 gi|146738131|gb|ABQ42599.1| ATP-binding cassette t (2261) 2541 506.4 2.3e-140 gi|149738947|ref|XP_001493840.1| PREDICTED: ATP-bi (2261) 2537 505.6 3.9e-140 gi|194033837|ref|XP_001924795.1| PREDICTED: simila ( 970) 2528 503.5 7.4e-140 gi|66735144|gb|AAY53813.1| ATP-binding cassette su (2261) 2528 503.8 1.3e-139 gi|73971917|ref|XP_538773.2| PREDICTED: similar to (2261) 2524 503.1 2.3e-139 gi|123123281|emb|CAM27437.1| ATP-binding cassette, (2261) 2515 501.3 7.6e-139 gi|495257|emb|CAA53530.1| ABC transporter [Mus mus (2201) 2509 500.1 1.7e-138 gi|51338775|sp|P41233|ABCA1_MOUSE ATP-binding cass (2261) 2509 500.1 1.7e-138 gi|11611825|gb|AAG39073.1|AF287263_1 ATP-binding c (2198) 2498 498.0 7.5e-138 gi|126335198|ref|XP_001368140.1| PREDICTED: simila (2254) 2493 497.0 1.5e-137 gi|28912192|gb|AAO53557.1| ATP-binding cassette 1 (2201) 2480 494.5 8.5e-137 gi|149037187|gb|EDL91718.1| rCG31986 [Rattus norve (2261) 2480 494.5 8.7e-137 gi|149638737|ref|XP_001516009.1| PREDICTED: simila (2266) 2469 492.3 3.8e-136 gi|18028983|gb|AAL56247.1|AF362377_1 ATP-binding c (2260) 2414 481.6 6.5e-133 gi|189515085|ref|XP_687304.3| PREDICTED: ATP-bindi (2274) 2158 431.7 7e-118 gi|118103229|ref|XP_001233948.1| PREDICTED: simila (1346) 1983 397.3 9.3e-108 gi|109110902|ref|XP_001106713.1| PREDICTED: simila (1081) 1931 387.1 9e-105 gi|47211165|emb|CAF95992.1| unnamed protein produc (1910) 1915 384.2 1.2e-103 gi|189524920|ref|XP_001920862.1| PREDICTED: simila (1822) 1818 365.3 5.6e-98 gi|119589970|gb|EAW69564.1| ATP-binding cassette, (1113) 1716 345.1 3.9e-92 gi|119589966|gb|EAW69560.1| ATP-binding cassette, (1271) 1716 345.2 4.2e-92 gi|119589965|gb|EAW69559.1| ATP-binding cassette, (1973) 1716 345.4 5.7e-92 gi|119589964|gb|EAW69558.1| ATP-binding cassette, (2007) 1716 345.4 5.8e-92 gi|15042034|dbj|BAB62294.1| ABCA-SSN [Homo sapiens (2008) 1716 345.4 5.8e-92 gi|119589962|gb|EAW69556.1| ATP-binding cassette, (2145) 1716 345.4 6.1e-92 gi|22725156|gb|AAN04657.1| ABC transporter ABCA7 [ (2146) 1716 345.4 6.1e-92 gi|12656651|gb|AAK00959.1|AF328787_1 ABC transport (2146) 1716 345.4 6.1e-92 gi|9211112|gb|AAF85794.1|AF250238_1 macrophage ABC (2146) 1716 345.4 6.1e-92 gi|161784300|sp|Q8IZY2.3|ABCA7_HUMAN ATP-binding c (2146) 1716 345.4 6.1e-92 gi|109122718|ref|XP_001093576.1| PREDICTED: simila (2010) 1711 344.4 1.1e-91 gi|109122716|ref|XP_001093459.1| PREDICTED: simila (2148) 1711 344.5 1.2e-91 gi|190582301|gb|EDV22374.1| hypothetical protein T (1624) 1707 343.6 1.7e-91 gi|119589963|gb|EAW69557.1| ATP-binding cassette, (2158) 1697 341.7 8e-91 gi|119895227|ref|XP_589159.3| PREDICTED: similar t (2149) 1690 340.4 2e-90 gi|169158637|emb|CAQ13899.1| novel protein similar ( 957) 1680 338.1 4.5e-90 gi|114674424|ref|XP_512226.2| PREDICTED: ATP-bindi (1192) 1681 338.3 4.6e-90 gi|57231399|gb|AAW47416.1| ABCA4 [Macaca fascicula (2273) 1682 338.8 6.3e-90 gi|189515696|ref|XP_683123.3| PREDICTED: similar t (2398) 1680 338.5 8.5e-90 gi|149034618|gb|EDL89355.1| ATP-binding cassette, (2162) 1676 337.6 1.4e-89 >>gi|62087258|dbj|BAD92076.1| ATP-binding cassette, sub- (403 aa) initn: 2679 init1: 2679 opt: 2679 Z-score: 2829.9 bits: 532.5 E(): 5.5e-149 Smith-Waterman score: 2679; 100.000% identity (100.000% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLL 10 20 30 40 50 60 70 80 90 100 110 120 fh1441 LLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDI 70 80 90 100 110 120 130 140 150 160 170 180 fh1441 LKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVV 130 140 150 160 170 180 190 200 210 220 230 240 fh1441 FFLITVLIQYRFFIRPRPVNAKLSPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FFLITVLIQYRFFIRPRPVNAKLSPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYR 190 200 210 220 230 240 250 260 270 280 290 300 fh1441 RKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIH 250 260 270 280 290 300 310 320 330 340 350 360 fh1441 EVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYA 310 320 330 340 350 360 370 380 390 400 fh1441 GNYSGGNKRKLSTAMALIGGPPVVFLVSITVDGKLLFWPEWKT ::::::::::::::::::::::::::::::::::::::::::: gi|620 GNYSGGNKRKLSTAMALIGGPPVVFLVSITVDGKLLFWPEWKT 370 380 390 400 >>gi|119579398|gb|EAW58994.1| ATP-binding cassette, sub- (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|119 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|119 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|13876613|gb|AAK43526.1|AF287262_1 ATP-binding casse (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|138 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|138 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|187955036|gb|AAI46857.1| ATP-binding cassette, sub- (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|187 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|187 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|13123945|sp|O95477|ABCA1_HUMAN ATP-binding cassette (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|131 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|131 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|9755159|gb|AAF98175.1|AF285167_1 ATP-binding casset (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|975 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|975 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|975 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|15212107|dbj|BAB63210.1| ABCA1 [Homo sapiens] g (2261 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2692.1 bits: 509.5 E(): 2.6e-141 Smith-Waterman score: 2557; 100.000% identity (100.000% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|152 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|152 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 >>gi|5734101|gb|AAD49849.1|AF165281_1 ATP cassette bindi (2201 aa) initn: 2554 init1: 2554 opt: 2554 Z-score: 2689.1 bits: 508.9 E(): 3.9e-141 Smith-Waterman score: 2554; 99.741% identity (100.000% similar) in 386 aa overlap (1-386:1623-2008) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|573 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1600 1610 1620 1630 1640 1650 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|573 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1660 1670 1680 1690 1700 1710 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|573 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1720 1730 1740 1750 1760 1770 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|573 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED 1780 1790 1800 1810 1820 1830 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|573 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1840 1850 1860 1870 1880 1890 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|573 SSTFKMLTGDTTVTRGDAFLNRNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1900 1910 1920 1930 1940 1950 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|573 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 1960 1970 1980 1990 2000 2010 400 fh1441 VDGKLLFWPEWKT gi|573 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2020 2030 2040 2050 2060 2070 >>gi|114625982|ref|XP_520163.2| PREDICTED: ATP-binding c (2254 aa) initn: 2551 init1: 2551 opt: 2551 Z-score: 2685.8 bits: 508.3 E(): 5.9e-141 Smith-Waterman score: 2551; 99.741% identity (99.741% similar) in 386 aa overlap (1-386:1676-2061) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|114 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1650 1660 1670 1680 1690 1700 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1710 1720 1730 1740 1750 1760 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1770 1780 1790 1800 1810 1820 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|114 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLPPLNDED 1830 1840 1850 1860 1870 1880 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1890 1900 1910 1920 1930 1940 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1950 1960 1970 1980 1990 2000 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2010 2020 2030 2040 2050 2060 400 fh1441 VDGKLLFWPEWKT gi|114 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2070 2080 2090 2100 2110 2120 >>gi|114625980|ref|XP_001138040.1| PREDICTED: ATP-bindin (2261 aa) initn: 2551 init1: 2551 opt: 2551 Z-score: 2685.8 bits: 508.3 E(): 5.9e-141 Smith-Waterman score: 2551; 99.741% identity (99.741% similar) in 386 aa overlap (1-386:1683-2068) 10 20 30 fh1441 KAKHLQFISGVKPVIYWLSNFVWDMCNYVV :::::::::::::::::::::::::::::: gi|114 VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVV 1660 1670 1680 1690 1700 1710 40 50 60 70 80 90 fh1441 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTS 1720 1730 1740 1750 1760 1770 100 110 120 130 140 150 fh1441 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADAL 1780 1790 1800 1810 1820 1830 160 170 180 190 200 210 fh1441 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDED ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|114 ERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLPPLNDED 1840 1850 1860 1870 1880 1890 220 230 240 250 260 270 fh1441 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGK 1900 1910 1920 1930 1940 1950 280 290 300 310 320 330 fh1441 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFAL 1960 1970 1980 1990 2000 2010 340 350 360 370 380 390 fh1441 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLVSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPT 2020 2030 2040 2050 2060 2070 400 fh1441 VDGKLLFWPEWKT gi|114 TGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK 2080 2090 2100 2110 2120 2130 403 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 18:11:46 2008 done: Sat Aug 9 18:14:17 2008 Total Scan time: 823.460 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]