hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-18334394/chunk_1/iprscan-20080809-18334394.nocrc
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Query sequence: fh15103
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00004.19.fs ATPase family associated with various cellul    39.0    1.4e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00004.19.fs   1/1      20    68 ..   154   215 .]    39.0  1.4e-11

Alignments of top-scoring domains:
PF00004.19.fs: domain 1 of 1, from 20 to 68: score 39.0, E = 1.4e-11
                   *->eRleIlkihlkkmplalcqerselakdvdldelakelArrtpgfsga
                      +RleIl+++ +++pla         +dvdl      +A+ t+ f+ga
     fh15103    20    SRLEILNVLSDSLPLA---------DDVDLQH----VASVTDSFTGA 53   

                   dlaalcreAalralr<-*
                   dl+al+  A+l al    
     fh15103    54 DLKALLYNAQLEALH    68   

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