hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-18585660/chunk_1/iprscan-20080809-18585660.nocrc
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Query sequence: fh15436
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00462                                                 135.6    5.2e-36   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00462    1/1      41   175 ..     1   156 []   135.6  5.2e-36

Alignments of top-scoring domains:
SM00462: domain 1 of 1, from 41 to 175: score 135.6, E = 5.2e-36
                   *->segvsfeVkYLGsvevpearkSlapgkglqvlqeairklr.......
                      +egv++++k +G+ ev++ar       g+ ++q+ + kl++   + +
     fh15436    41    GEGVRYKAKLIGIDEVSAAR-------GDKLCQDSMMKLKgvvagar 80   

                   sekkkpqkvilsvSsdgvklidektkqvlaehplrrIsfcaadpqrwntG
                   s+++++qk+ l +S++g+k+ dekt+++ ++h+++ Is++a d+      
     fh15436    81 SKGEHKQKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDI------ 124  

                   gdgstdddrvFgyiardpgssgSnrgtsrfaCHVFrcekaaaedialaig
                        +d+r Fgy+++++g          +++ ++++++aa e ++l+++
     fh15436   125 -----TDHRAFGYVCGKEG---------NHRFVAIKTAQAA-EPVILDLR 159  

                   qaFqvayelklkarse<-*
                   ++Fq++yelk+++  e   
     fh15436   160 DLFQLIYELKQREELE    175  

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