# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh16410.fasta.nr -Q fh16410.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh16410, 699 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6819845 sequences Expectation_n fit: rho(ln(x))= 5.2196+/-0.000182; mu= 12.4077+/- 0.010 mean_var=69.0171+/-13.686, 0's: 38 Z-trim: 79 B-trim: 2204 in 2/64 Lambda= 0.154382 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087266|dbj|BAD92080.1| BTAF1 RNA polymerase I ( 699) 4631 1040.8 0 gi|20988306|gb|AAH29930.1| BTAF1 protein [Homo sap ( 680) 4493 1010.1 0 gi|12643543|sp|O14981|BTAF1_HUMAN TATA-binding pro (1849) 4497 1011.2 0 gi|73998226|ref|XP_543929.2| PREDICTED: similar to (1849) 4474 1006.1 0 gi|62948072|gb|AAH94345.1| Btaf1 protein [Mus musc ( 990) 4420 993.9 0 gi|109460086|ref|XP_347207.3| PREDICTED: similar t (1848) 4423 994.7 0 gi|123858774|ref|NP_001074175.1| BTAF1 RNA polymer (1848) 4420 994.1 0 gi|119391227|dbj|BAF41982.1| TBP-associated factor (1848) 4420 994.1 0 gi|126273285|ref|XP_001375597.1| PREDICTED: simila (1878) 4347 977.8 0 gi|118092869|ref|XP_421689.2| PREDICTED: similar t (1865) 4251 956.4 0 gi|125833836|ref|XP_693729.2| PREDICTED: similar t (1876) 3985 897.2 0 gi|26353950|dbj|BAC40605.1| unnamed protein produc ( 594) 3878 873.0 0 gi|156217098|gb|EDO38021.1| predicted protein [Nem (1872) 3241 731.5 5.7e-208 gi|47210118|emb|CAF91684.1| unnamed protein produc (1996) 3225 727.9 7e-207 gi|91088413|ref|XP_966659.1| PREDICTED: similar to (1810) 3073 694.1 1e-196 gi|157012531|gb|EAA01172.5| AGAP001820-PA [Anophel (1987) 2854 645.3 5.3e-182 gi|194166736|gb|EDW81637.1| GK12181 [Drosophila wi (1953) 2811 635.7 4e-179 gi|81170682|sp|O43065.4|MOT1_SCHPO Probable helica (1953) 2739 619.7 2.7e-174 gi|119917480|ref|XP_601966.3| PREDICTED: similar t (1756) 2680 606.5 2.2e-170 gi|194042483|ref|XP_001925252.1| PREDICTED: simila (1543) 2676 605.6 3.7e-170 gi|190345483|gb|EDK37379.2| hypothetical protein P (1895) 2644 598.5 6.1e-168 gi|146419691|ref|XP_001485806.1| hypothetical prot (1895) 2640 597.6 1.1e-167 gi|49526345|emb|CAG59969.1| unnamed protein produc (1904) 2640 597.6 1.1e-167 gi|44983247|gb|AAS52429.1| AEL256Cp [Ashbya gossyp (1866) 2623 593.8 1.5e-166 gi|156117158|gb|EDO18623.1| hypothetical protein K (1902) 2593 587.2 1.6e-164 gi|162683536|gb|EDQ69945.1| SNF2 superfamily chrom (2041) 2519 570.7 1.6e-159 gi|116505418|gb|EAU88313.1| hypothetical protein C (2733) 2490 564.3 1.7e-157 gi|49644158|emb|CAH00110.1| unnamed protein produc (1873) 2462 558.0 9.6e-156 gi|134084423|emb|CAK97415.1| unnamed protein produ (1895) 2450 555.3 6.2e-155 gi|119413247|gb|EAW23188.1| TBP associated factor (1920) 2447 554.6 9.9e-155 gi|66847965|gb|EAL88295.1| TBP associated factor ( (1891) 2436 552.2 5.4e-154 gi|159130807|gb|EDP55920.1| TBP associated factor (1891) 2436 552.2 5.4e-154 gi|119397720|gb|EAW08151.1| TBP associated factor (1901) 2434 551.7 7.3e-154 gi|83764679|dbj|BAE54823.1| unnamed protein produc (1894) 2413 547.1 1.9e-152 gi|114194610|gb|EAU36310.1| hypothetical protein A (1896) 2405 545.3 6.4e-152 gi|164646725|gb|EDR10970.1| SNF2 superfamily chrom (1936) 2404 545.1 7.6e-152 gi|145339485|ref|NP_190996.2| ATP binding / DNA bi (2038) 2398 543.7 2e-151 gi|125538184|gb|EAY84579.1| hypothetical protein O ( 936) 2375 538.4 3.7e-150 gi|49389246|dbj|BAD25208.1| putative SNF2 domain-c (2057) 2375 538.6 7.1e-150 gi|417308|sp|P32333|MOT1_YEAST TATA-binding protei (1867) 2367 536.8 2.2e-149 gi|190407873|gb|EDV11138.1| helicase [Saccharomyce (1867) 2367 536.8 2.2e-149 gi|154704980|gb|EDO04719.1| hypothetical protein S (1805) 2362 535.7 4.7e-149 gi|149386639|gb|ABN66547.2| transcriptional access (1901) 2348 532.6 4.3e-148 gi|46434315|gb|EAK93728.1| hypothetical protein Ca (1915) 2334 529.5 3.7e-147 gi|90303223|gb|EAS32854.1| hypothetical protein CI (1905) 2303 522.6 4.5e-145 gi|187972145|gb|EDU39644.1| helicase SWR1 [Pyrenop (1794) 2291 519.9 2.7e-144 gi|157347377|emb|CAO17906.1| unnamed protein produ (1592) 2290 519.6 2.9e-144 gi|160703388|gb|EAT80899.2| hypothetical protein S (1950) 2274 516.1 4e-143 gi|6822074|emb|CAB71002.1| TATA box binding protei (2049) 2070 470.7 2e-129 gi|78190661|gb|ABB29652.1| SNF2 family DNA-depende ( 439) 2056 467.1 5e-129 >>gi|62087266|dbj|BAD92080.1| BTAF1 RNA polymerase II, B (699 aa) initn: 4631 init1: 4631 opt: 4631 Z-score: 5568.3 bits: 1040.8 E(): 0 Smith-Waterman score: 4631; 100.000% identity (100.000% similar) in 699 aa overlap (1-699:1-699) 10 20 30 40 50 60 fh1641 KLWFKNTEDYRRTALTRLTSGVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KLWFKNTEDYRRTALTRLTSGVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCF 10 20 30 40 50 60 70 80 90 100 110 120 fh1641 ATLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ATLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQ 70 80 90 100 110 120 130 140 150 160 170 180 fh1641 QDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSL 130 140 150 160 170 180 190 200 210 220 230 240 fh1641 VVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDI 190 200 210 220 230 240 250 260 270 280 290 300 fh1641 DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 250 260 270 280 290 300 310 320 330 340 350 360 fh1641 MPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQ 310 320 330 340 350 360 370 380 390 400 410 420 fh1641 DLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQ 370 380 390 400 410 420 430 440 450 460 470 480 fh1641 ALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGN 430 440 450 460 470 480 490 500 510 520 530 540 fh1641 GSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIV 490 500 510 520 530 540 550 560 570 580 590 600 fh1641 SRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVN 550 560 570 580 590 600 610 620 630 640 650 660 fh1641 VYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKAD 610 620 630 640 650 660 670 680 690 fh1641 TSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK ::::::::::::::::::::::::::::::::::::::: gi|620 TSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK 670 680 690 >>gi|20988306|gb|AAH29930.1| BTAF1 protein [Homo sapiens (680 aa) initn: 4493 init1: 4493 opt: 4493 Z-score: 5402.4 bits: 1010.1 E(): 0 Smith-Waterman score: 4493; 100.000% identity (100.000% similar) in 678 aa overlap (22-699:3-680) 10 20 30 40 50 60 fh1641 KLWFKNTEDYRRTALTRLTSGVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCF ::::::::::::::::::::::::::::::::::::::: gi|209 ACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCF 10 20 30 40 70 80 90 100 110 120 fh1641 ATLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 ATLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQ 50 60 70 80 90 100 130 140 150 160 170 180 fh1641 QDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSL 110 120 130 140 150 160 190 200 210 220 230 240 fh1641 VVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 VVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDI 170 180 190 200 210 220 250 260 270 280 290 300 fh1641 DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFL 230 240 250 260 270 280 310 320 330 340 350 360 fh1641 MPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 MPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQ 290 300 310 320 330 340 370 380 390 400 410 420 fh1641 DLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQ 350 360 370 380 390 400 430 440 450 460 470 480 fh1641 ALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 ALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGN 410 420 430 440 450 460 490 500 510 520 530 540 fh1641 GSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 GSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIV 470 480 490 500 510 520 550 560 570 580 590 600 fh1641 SRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVN 530 540 550 560 570 580 610 620 630 640 650 660 fh1641 VYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 VYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKAD 590 600 610 620 630 640 670 680 690 fh1641 TSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK ::::::::::::::::::::::::::::::::::::::: gi|209 TSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK 650 660 670 680 >>gi|12643543|sp|O14981|BTAF1_HUMAN TATA-binding protein (1849 aa) initn: 4493 init1: 4493 opt: 4497 Z-score: 5400.9 bits: 1011.2 E(): 0 Smith-Waterman score: 4497; 97.421% identity (98.424% similar) in 698 aa overlap (3-699:1152-1849) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|126 VRHMAARCVGVMSKIATMETMNIFLEKVLPWLGAIDDSVKQEGAIEALACVMEQLDVGIV 1130 1140 1150 1160 1170 1180 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER 1190 1200 1210 1220 1230 1240 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 1250 1260 1270 1280 1290 1300 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG 1310 1320 1330 1340 1350 1360 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 1370 1380 1390 1400 1410 1420 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 1430 1440 1450 1460 1470 1480 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1490 1500 1510 1520 1530 1540 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA 1550 1560 1570 1580 1590 1600 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE 1610 1620 1630 1640 1650 1660 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 1670 1680 1690 1700 1710 1720 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 1730 1740 1750 1760 1770 1780 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL 1790 1800 1810 1820 1830 1840 fh1641 ENFMHSLK :::::::: gi|126 ENFMHSLK >>gi|73998226|ref|XP_543929.2| PREDICTED: similar to TAT (1849 aa) initn: 4470 init1: 4470 opt: 4474 Z-score: 5373.2 bits: 1006.1 E(): 0 Smith-Waterman score: 4474; 96.705% identity (98.281% similar) in 698 aa overlap (3-699:1152-1849) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|739 VRHMAARCVGIMSKIATMETMNIFLEKVLPWLGAIDDNIKQEGAIEALACVMEQLDVGIV 1130 1140 1150 1160 1170 1180 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|739 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER 1190 1200 1210 1220 1230 1240 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 1250 1260 1270 1280 1290 1300 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTG 1310 1320 1330 1340 1350 1360 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 1370 1380 1390 1400 1410 1420 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 1430 1440 1450 1460 1470 1480 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1490 1500 1510 1520 1530 1540 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA ::::::::::.::::::::::::::::::::::::::::::::::::::::::.:.:::: gi|739 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLA 1550 1560 1570 1580 1590 1600 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE 1610 1620 1630 1640 1650 1660 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 1670 1680 1690 1700 1710 1720 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 1730 1740 1750 1760 1770 1780 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL 1790 1800 1810 1820 1830 1840 fh1641 ENFMHSLK :::::::: gi|739 ENFMHSLK >>gi|62948072|gb|AAH94345.1| Btaf1 protein [Mus musculus (990 aa) initn: 4473 init1: 4416 opt: 4420 Z-score: 5312.1 bits: 993.9 E(): 0 Smith-Waterman score: 4420; 95.272% identity (98.138% similar) in 698 aa overlap (3-699:293-990) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|629 VRHMAARCIGVMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIV 270 280 290 300 310 320 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|629 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER 330 340 350 360 370 380 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 390 400 410 420 430 440 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 ICILAGDHCQRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG 450 460 470 480 490 500 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 510 520 530 540 550 560 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 570 580 590 600 610 620 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 630 640 650 660 670 680 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA ::::::::::.::::::::::::::::::::::::::::::::::::::::::.:.:::. gi|629 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLT 690 700 710 720 730 740 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|629 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRILIFCQLKSMLDIVE 750 760 770 780 790 800 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 810 820 830 840 850 860 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 870 880 890 900 910 920 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::.::::::::::.::::::::: :::::::.: gi|629 ENSSLQSMGTDQLLDLFTLDKDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNL 930 940 950 960 970 980 fh1641 ENFMHSLK :.::.::. gi|629 ETFMRSLE 990 >>gi|109460086|ref|XP_347207.3| PREDICTED: similar to TA (1848 aa) initn: 4478 init1: 4419 opt: 4423 Z-score: 5311.8 bits: 994.7 E(): 0 Smith-Waterman score: 4423; 95.415% identity (98.138% similar) in 698 aa overlap (3-699:1151-1848) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|109 VRHMAARCVGVMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIV 1130 1140 1150 1160 1170 1180 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|109 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER 1190 1200 1210 1220 1230 1240 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 1250 1260 1270 1280 1290 1300 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ICILAGDHCQRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG 1310 1320 1330 1340 1350 1360 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 1370 1380 1390 1400 1410 1420 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 1430 1440 1450 1460 1470 1480 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1490 1500 1510 1520 1530 1540 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA ::::::::::.::::::::::::::::::::::::::::::::::::::::::.:.:::: gi|109 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKNTTEKLA 1550 1560 1570 1580 1590 1600 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE ::::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|109 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGTSSESGTESVVAQHRILIFCQLKSMLDIVE 1610 1620 1630 1640 1650 1660 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 1670 1680 1690 1700 1710 1720 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 1730 1740 1750 1760 1770 1780 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::.::::::::::.::::::::: :::::::.: gi|109 ENSSLQSMGTDQLLDLFTLDKDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNL 1790 1800 1810 1820 1830 1840 fh1641 ENFMHSLK :.::.::. gi|109 ETFMRSLE >>gi|123858774|ref|NP_001074175.1| BTAF1 RNA polymerase (1848 aa) initn: 4473 init1: 4416 opt: 4420 Z-score: 5308.2 bits: 994.1 E(): 0 Smith-Waterman score: 4420; 95.272% identity (98.138% similar) in 698 aa overlap (3-699:1151-1848) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|123 VRHMAARCIGVMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIV 1130 1140 1150 1160 1170 1180 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|123 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER 1190 1200 1210 1220 1230 1240 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 1250 1260 1270 1280 1290 1300 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ICILAGDHCQRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG 1310 1320 1330 1340 1350 1360 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 1370 1380 1390 1400 1410 1420 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 1430 1440 1450 1460 1470 1480 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1490 1500 1510 1520 1530 1540 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA ::::::::::.::::::::::::::::::::::::::::::::::::::::::.:.:::. gi|123 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLT 1550 1560 1570 1580 1590 1600 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|123 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRILIFCQLKSMLDIVE 1610 1620 1630 1640 1650 1660 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 1670 1680 1690 1700 1710 1720 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 1730 1740 1750 1760 1770 1780 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::.::::::::::.::::::::: :::::::.: gi|123 ENSSLQSMGTDQLLDLFTLDKDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNL 1790 1800 1810 1820 1830 1840 fh1641 ENFMHSLK :.::.::. gi|123 ETFMRSLE >>gi|119391227|dbj|BAF41982.1| TBP-associated factor 170 (1848 aa) initn: 4473 init1: 4416 opt: 4420 Z-score: 5308.2 bits: 994.1 E(): 0 Smith-Waterman score: 4420; 95.272% identity (98.138% similar) in 698 aa overlap (3-699:1151-1848) 10 20 30 fh1641 KLWFKNTED-YRRTALTRLTSGVMEQLDVGIV :. .: .. . . . :::::::::: gi|119 VRHMAARCIGVMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIV 1130 1140 1150 1160 1170 1180 40 50 60 70 80 90 fh1641 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKER ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|119 PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER 1190 1200 1210 1220 1230 1240 100 110 120 130 140 150 fh1641 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS 1250 1260 1270 1280 1290 1300 160 170 180 190 200 210 fh1641 ICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ICILAGDHCQRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTG 1310 1320 1330 1340 1350 1360 220 230 240 250 260 270 fh1641 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK 1370 1380 1390 1400 1410 1420 280 290 300 310 320 330 fh1641 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE 1430 1440 1450 1460 1470 1480 340 350 360 370 380 390 fh1641 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK 1490 1500 1510 1520 1530 1540 400 410 420 430 440 450 fh1641 CDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLA ::::::::::.::::::::::::::::::::::::::::::::::::::::::.:.:::. gi|119 CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLT 1550 1560 1570 1580 1590 1600 460 470 480 490 500 510 fh1641 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVE :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|119 VQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRILIFCQLKSMLDIVE 1610 1620 1630 1640 1650 1660 520 530 540 550 560 570 fh1641 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV 1670 1680 1690 1700 1710 1720 580 590 600 610 620 630 fh1641 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 1730 1740 1750 1760 1770 1780 640 650 660 670 680 690 fh1641 ENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSL :::::::::::::::::::::::::::::.::::::::::.::::::::: :::::::.: gi|119 ENSSLQSMGTDQLLDLFTLDKDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNL 1790 1800 1810 1820 1830 1840 fh1641 ENFMHSLK :.::.::. gi|119 ETFMRSLE >>gi|126273285|ref|XP_001375597.1| PREDICTED: similar to (1878 aa) initn: 4158 init1: 4130 opt: 4347 Z-score: 5220.2 bits: 977.8 E(): 0 Smith-Waterman score: 4347; 94.000% identity (97.571% similar) in 700 aa overlap (3-699:1180-1878) 10 20 30 fh1641 KLWFKNTEDYRRT--ALTRLTSGVMEQLDVGI :. .: . :. :.: ::::::::: gi|126 VRHMAARCVGVMSKIATMETMNIFLEKVLPWIGAIDDSTKQEGAIEALAS-VMEQLDVGI 1150 1160 1170 1180 1190 1200 40 50 60 70 80 90 fh1641 VPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKE :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|126 VPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKE 1210 1220 1230 1240 1250 1260 100 110 120 130 140 150 fh1641 RHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQ ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|126 RHFLEQLLDGKKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQ 1270 1280 1290 1300 1310 1320 160 170 180 190 200 210 fh1641 SICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYT :::::::::: :::::::::::::::::::::::::::::::::::::::.::::::::: gi|126 SICILAGDHCFRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYT 1330 1340 1350 1360 1370 1380 220 230 240 250 260 270 fh1641 GPPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAV ::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::: gi|126 GPPTERIRLQHQVKKHNLIVASYDVVRNDIDFFKNIKFNYCILDEGHVIKNGKTKLSKAV 1390 1400 1410 1420 1430 1440 280 290 300 310 320 330 fh1641 KQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSR 1450 1460 1470 1480 1490 1500 340 350 360 370 380 390 fh1641 EQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EQEAGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRA 1510 1520 1530 1540 1550 1560 400 410 420 430 440 450 fh1641 KCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKL :::::::::.:.:.::::::::::::::::::::::::::::::::: ::::::.:.:.: gi|126 KCDVDETVSTAALAEETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEFKNTTEQL 1570 1580 1590 1600 1610 1620 460 470 480 490 500 510 fh1641 AVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIV :.:::::.:::::::::::::::::::::: ::::::::.:::::::::::::::::::: gi|126 AAQNSSLRDIQHAPKLSALKQLLLDCGLGNTSTSESGTEAVVAQHRILIFCQLKSMLDIV 1630 1640 1650 1660 1670 1680 520 530 540 550 560 570 fh1641 EHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADT :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|126 EHDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADT 1690 1700 1710 1720 1730 1740 580 590 600 610 620 630 fh1641 VVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS 1750 1760 1770 1780 1790 1800 640 650 660 670 680 fh1641 QENSSLQSMGTDQLLDLFTLDKDGKAEKADTST-SGKASMKSILENLSDLWDQEQYDSEY :::::::::::::::::::::::::.:::.::: ::::::::.::::::::::.:::.:: gi|126 QENSSLQSMGTDQLLDLFTLDKDGKVEKANTSTTSGKASMKSVLENLSDLWDQDQYDTEY 1810 1820 1830 1840 1850 1860 690 fh1641 SLENFMHSLK ::.::::::: gi|126 SLDNFMHSLK 1870 >>gi|118092869|ref|XP_421689.2| PREDICTED: similar to TB (1865 aa) initn: 4045 init1: 4045 opt: 4251 Z-score: 5104.7 bits: 956.4 E(): 0 Smith-Waterman score: 4251; 91.571% identity (96.571% similar) in 700 aa overlap (3-699:1167-1865) 10 20 30 fh1641 KLWFKNTEDYRRT--ALTRLTSGVMEQLDVGI :. .: . :. :. ::::::::: gi|118 VRHMAARCVGVMSKIATMETMNIFLEQVLPWLGAIDDNTKQEGAIEALAC-VMEQLDVGI 1140 1150 1160 1170 1180 1190 40 50 60 70 80 90 fh1641 VPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSAELIQLKAKE :::::::::::::::::::::::::::::::::::::::::::::::::: ::::.:::: gi|118 VPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQMKAKE 1200 1210 1220 1230 1240 1250 100 110 120 130 140 150 fh1641 RHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQ ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|118 RHFLEQLLDGKKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQ 1260 1270 1280 1290 1300 1310 160 170 180 190 200 210 fh1641 SICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYT :::::::::: :::::::.::.. .:::::::::::::::::::::::::.::::::::: gi|118 SICILAGDHCLRAQEYARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYT 1320 1330 1340 1350 1360 1370 220 230 240 250 260 270 fh1641 GPPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAV :::::: :::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 GPPTERARLQYQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAV 1380 1390 1400 1410 1420 1430 280 290 300 310 320 330 fh1641 KQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 KQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSR 1440 1450 1460 1470 1480 1490 340 350 360 370 380 390 fh1641 EQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRA :::::::::.::::::::::::::::::::::::::::::::.::::::::::::::::: gi|118 EQEAGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCVLSPLQVQLYEDFAKSRA 1500 1510 1520 1530 1540 1550 400 410 420 430 440 450 fh1641 KCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKL :::.:::::: .: ::::::::::::::::::::::::::::::::: ::::.: .:.: gi|118 KCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEYKRITEQL 1560 1570 1580 1590 1600 1610 460 470 480 490 500 510 fh1641 AVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIV :..::::.:::::::::::::::::::::::..::::::.:::::::::::::::::::: gi|118 AAHNSSLRDIQHAPKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRILIFCQLKSMLDIV 1620 1630 1640 1650 1660 1670 520 530 540 550 560 570 fh1641 EHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADT :::::.:.:::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|118 EHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADT 1680 1690 1700 1710 1720 1730 580 590 600 610 620 630 fh1641 VVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 VVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS 1740 1750 1760 1770 1780 1790 640 650 660 670 680 fh1641 QENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTS-GKASMKSILENLSDLWDQEQYDSEY :::.:::::::.:::::::::::::.:: ::::: :::::::.::::..::::::::.:: gi|118 QENASLQSMGTEQLLDLFTLDKDGKTEKPDTSTSSGKASMKSVLENLGELWDQEQYDTEY 1800 1810 1820 1830 1840 1850 690 fh1641 SLENFMHSLK :::::::::: gi|118 SLENFMHSLK 1860 699 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 19:49:26 2008 done: Sat Aug 9 19:51:26 2008 Total Scan time: 967.030 Total Display time: 0.410 Function used was FASTA [version 34.26.5 April 26, 2007]