hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-20173098/chunk_1/iprscan-20080809-20173098.nocrc
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Query sequence: fh16749
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00322                                                 206.7    2.2e-57   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00322    1/3      34   106 ..     1    63 []    72.9    4e-17
SM00322    2/3     124   194 ..     1    63 []    69.9  3.2e-16
SM00322    3/3     225   298 ..     1    63 []    63.9  2.1e-14

Alignments of top-scoring domains:
SM00322: domain 1 of 3, from 34 to 106: score 72.9, E = 4e-17
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg.......
                       +  +e+ ipa+k+G++IGkgG+tIk+++e  gvk++ +++++ +++
     fh16749    34    GnAVQEImIPASKAGLVIGKGGETIKQLQERAGVKMVMIQdgpqntg 80   

                   .ertvtItGppenvekAkelileile<-*
                    +++++ItG+p +v++Ake++le+++   
     fh16749    81 aDKPLRITGDPYKVQQAKEMVLELIR    106  

SM00322: domain 2 of 3, from 124 to 194: score 69.9, E = 3.2e-16
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg......e
                       ++ i v+ip   vG++IG++G++Ikki+++ gv+I++++++++++e
     fh16749   124    GnEGIDVpIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPddgttpE 170  

                   rtvtItGppenvekAkelileile<-*
                   r+  ItGpp+ +++A+e i ++l+   
     fh16749   171 RIAQITGPPDRCQHAAEIITDLLR    194  

SM00322: domain 3 of 3, from 225 to 298: score 63.9, E = 2.1e-14
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg.......
                         +  + +p+ k G+iIGkgG+tIk+i +++g++I++ ++++++ +
     fh16749   225    GlQEFNFiVPTGKTGLIIGKGGETIKSISQQSGARIELQRnpppnad 271  

                   ..ertvtItGppenvekAkelileile<-*
                   ++ + +tI+G+p+++  A++li+e++    
     fh16749   272 pnMKLFTIRGTPQQIDYARQLIEEKIG    298  

//