hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-20301716/chunk_1/iprscan-20080809-20301716.nocrc
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Query sequence: fh17076
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00102.17.fs Protein-tyrosine phosphatase              177.1    3.9e-50   1
PF00102.17.ls Protein-tyrosine phosphatase               38.9    3.1e-10   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00102.17.fs   1/1     706   809 ..     1   118 [.   177.1  3.9e-50
PF00102.17.ls   1/1     706   824 .]     1   275 []    38.9  3.1e-10

Alignments of top-scoring domains:
PF00102.17.fs: domain 1 of 1, from 706 to 809: score 177.1, E = 3.9e-50
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N++KNR++d lpyDh R+kLk + ++  sDYINAs i  +       
     fh17076   706    NIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEH------- 745  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   +++  ayIaTQgPl++Ti+DFW+Mvwe ++tvIVMLt lvE+g   ++ C
     fh17076   746 DPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGV--KQ-C 792  

                   aqYWPeeskeggsltyGditV<-*
                   ++YWP+    +g   y  ++V   
     fh17076   793 DRYWPD----EGASLYHVYEV    809  

PF00102.17.ls: domain 1 of 1, from 706 to 824: score 38.9, E = 3.1e-10
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N++KNR++d lpyDh R+kLk + ++  sDYINAs i  +       
     fh17076   706    NIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEH------- 745  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   +++  ayIaTQgPl++Ti+DFW+Mvwe ++tvIVMLt lvE+g   ++ C
     fh17076   746 DPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGV--KQ-C 792  

                   aqYWPeeskeggsltyGditVtlvseekeadytvRtleltngdgskinak
                   ++YWP+    +g   y  ++   vs                         
     fh17076   793 DRYWPD----EGASLYHVYE---VSR------------------------ 811  

                   qekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvelge
                                         +P                          
     fh17076   812 ----------------------APQQ------------------------ 815  

                   rspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidvfd
                     +d+g                                    g+      
     fh17076   816 --GDNG-----------------------------------CGKS----- 823  

                   iVkelRsqRpgmVQteeQYiFlydaile<-*
                                                  
     fh17076   824 ---------------------------R    824  

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