hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-20370212/chunk_1/iprscan-20080809-20370212.nocrc
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Query sequence: fh17232
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00215                                                  26.2     0.0029   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00215    1/1      29    89 ..     1   105 []    26.2   0.0029

Alignments of top-scoring domains:
SM00215: domain 1 of 1, from 29 to 89: score 26.2, E = 0.0029
                   *->CqNAvnnGsyYppLNkGakWdDiALtGRtEDtdDCsnrCtClnGrvs
                      C          p+   ++  +      R   t  C          v 
     fh17232    29    C---------VPA---SDPPV------RLRLTLLC----------VP 47   

                   lCtkvwCgpkpClLhgslsKSSnlsgeCplgqgcvpslsdqKqYtvHGDC
                     + vwCg+kpClL+g+++   +ls++Cplgq+c +++++q        C
     fh17232    48 --AQVWCGWKPCLLAGQPE---ALSAQCPLGQRCLEKAPGQ--------C 84   

                   fsvltsPC<-*
                      l++PC   
     fh17232    85 ---LRPPC    89   

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