hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-21022991/chunk_1/iprscan-20080809-21022991.nocrc
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Query sequence: fh17412
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00332                                                 155.1    7.2e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00332    1/1     170   507 ..     1   338 []   155.1  7.2e-42

Alignments of top-scoring domains:
SM00332: domain 1 of 1, from 170 to 507: score 155.1, E = 7.2e-42
                   *->es.sgknlglryglgessmqgwrkpmEDahvirp.........ffgV
                       s++g++++ +y+   + +++  +p ED+++ + ++++    ++f  
     fh17412   170    LSgVGSASNRSYSA--DGKGTESHPPEDSWLKFRsenncflygVFNG 214  

                   fDG.HGGseaakflsknlheilaeelsfdkdeslkeneelkdepesserl
                   +DG+     +a+ ls  l+   ++ + +++d                   
     fh17412   215 YDGnRVTNFVAQRLSAELLLGQLNAEHAEAD------------------- 245  

                   ngdksledveealrkaFlrtdeei..........................
                     ++ l++  ++ +++Fl+  ++   ++ + +++ +++ ++++ +++ ++
     fh17412   246 -VRRVLLQAFDVVERSFLESIDDAlaekaslqsqlpegvpqhqlppqyqk 294  

                   ...............sTAvvalirgnklyvANvGDSRavLcrngkd.swe
                     ++ ++ +++ +++++Avva++ +nklyvANvG  Ra Lc++  d++  
     fh17412   295 ilerlktlereisggAMAVVAVLLNNKLYVANVGTNRALLCKSTVDgLQ- 343  

                   gvrtysavqLteDHkpsnedEreRIeaaGGevepidrefvsngggvvwRv
                         ++qL +DH+ +nedE+ R++++G            ++ +  + +
     fh17412   344 ------VTQLNVDHTTENEDELFRLSQLGL--------DAGKIKQ--VGI 377  

                   nGvvisLavsRalGDfelKkkedelieenrlyekfdprlpgkepyvsaeP
                    +    ++ +R +GD++ K          ++y+++d+ + +k+ +++aeP
     fh17412   378 ICG---QESTRRIGDYKVK----------YGYTDIDLLSAAKSKPIIAEP 414  

                   evtvvelsqtlvptedddfliLASDGlWDvlsnqeavdivrkhlrkgddk
                   e++  +       +    fl+L+S Gl+  l+  +    + + ++ ++d+
     fh17412   415 EIHGAQPL-----DGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDT 459  

                   .evksaaqelaradslrskkhndpkeaaklLvdlAl............kD
                   + +k+++++         ++++++ +  k+++     +++++ +  +++ 
     fh17412   460 eFAKQTSLD---------AVAQAVVDRVKRIHSDTFasggerarfcprHE 500  

                   NiTvvvv<-*
                   ++T +v    
     fh17412   501 DMTLLVR    507  

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