# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh18602.fasta.nr -Q fh18602.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh18602, 317 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823092 sequences Expectation_n fit: rho(ln(x))= 5.5589+/-0.00019; mu= 8.9704+/- 0.011 mean_var=88.3890+/-16.962, 0's: 32 Z-trim: 36 B-trim: 0 in 0/65 Lambda= 0.136419 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088336|dbj|BAD92615.1| T-box 2 variant [Homo ( 317) 2181 438.6 6.3e-121 gi|51338800|sp|Q13207|TBX2_HUMAN T-box transcripti ( 702) 1970 397.4 3.6e-108 gi|924928|gb|AAA73861.1| TBX2 [Homo sapiens] g ( 702) 1970 397.4 3.6e-108 gi|119571809|gb|EAW51424.1| T-box 2, isoform CRA_a ( 712) 1970 397.4 3.7e-108 gi|50949481|emb|CAH10619.1| hypothetical protein [ ( 651) 1961 395.6 1.2e-107 gi|74143515|dbj|BAE28824.1| unnamed protein produc ( 701) 1958 395.0 1.9e-107 gi|2501116|sp|Q60707|TBX2_MOUSE T-box transcriptio ( 701) 1958 395.0 1.9e-107 gi|56205207|emb|CAI25161.1| T-box 2 [Mus musculus] ( 711) 1958 395.0 1.9e-107 gi|62511164|sp|Q863A2|TBX2_CANFA T-box transcripti ( 702) 1943 392.1 1.4e-106 gi|126307408|ref|XP_001362182.1| PREDICTED: simila ( 715) 1906 384.8 2.3e-104 gi|109114680|ref|XP_001106915.1| PREDICTED: simila ( 952) 1884 380.6 5.7e-103 gi|118574133|sp|Q3SA48|TBX2_XENTR T-box transcript ( 685) 1784 360.8 3.7e-97 gi|82174739|sp|Q9IBC8|TBX2A_XENLA T-box transcript ( 688) 1778 359.6 8.5e-97 gi|82187077|sp|Q6PCL0|TBX2B_XENLA T-box transcript ( 681) 1771 358.2 2.2e-96 gi|5421757|dbj|BAA82338.1| T-box transcription fac ( 688) 1761 356.2 8.6e-96 gi|3184526|gb|AAC41296.1| T-Box protein 2 [Gallus ( 382) 1706 345.2 1e-92 gi|5524273|gb|AAD44194.1| T-box protein [Danio rer ( 672) 1697 343.6 5.2e-92 gi|118574132|sp|Q7ZTU9|TBX2_BRARE T-box transcript ( 677) 1697 343.6 5.3e-92 gi|7328569|gb|AAF59835.1|AF179405_1 T-box transcri ( 687) 1697 343.6 5.3e-92 gi|68085234|gb|AAH51603.2| T-box 2b [Danio rerio] ( 687) 1697 343.6 5.3e-92 gi|46250376|gb|AAH68364.1| T-box gene 2a [Danio re ( 676) 1661 336.6 7.1e-90 gi|169146059|emb|CAQ15493.1| novel protein similar ( 686) 1661 336.6 7.2e-90 gi|148683829|gb|EDL15776.1| T-box 2, isoform CRA_b ( 385) 1611 326.5 4.3e-87 gi|149053737|gb|EDM05554.1| T-box 2 (predicted), i ( 364) 1551 314.7 1.5e-83 gi|149053738|gb|EDM05555.1| T-box 2 (predicted), i ( 587) 1551 314.9 2.1e-83 gi|7384857|dbj|BAA93082.1| transcription factor Tb ( 711) 1494 303.7 5.8e-80 gi|124054610|gb|ABM89506.1| Tbx3 [Scyliorhinus can ( 478) 1485 301.8 1.5e-79 gi|68534665|gb|AAH99621.1| T-box 3 (ulnar mammary ( 701) 1485 301.9 2e-79 gi|5805345|gb|AAD51956.1|AF173940_1 transcription ( 716) 1479 300.8 4.5e-79 gi|156230030|gb|AAI52186.1| Tbx2a protein [Danio r ( 287) 1468 298.3 1e-78 gi|3041821|gb|AAC12947.1| tbx3 [Homo sapiens] ( 468) 1469 298.6 1.3e-78 gi|126324399|ref|XP_001377459.1| PREDICTED: simila (1011) 1473 299.7 1.3e-78 gi|6073868|gb|AAD50989.2|AF170708_1 T-box protein ( 722) 1469 298.8 1.8e-78 gi|119618475|gb|EAW98069.1| T-box 3 (ulnar mammary ( 723) 1469 298.8 1.8e-78 gi|114647150|ref|XP_001154479.1| PREDICTED: T-box ( 723) 1469 298.8 1.8e-78 gi|109098860|ref|XP_001111958.1| PREDICTED: T-box ( 723) 1469 298.8 1.8e-78 gi|124481613|gb|AAI33069.1| Tbx3b protein [Danio r ( 689) 1468 298.6 2e-78 gi|149634177|ref|XP_001510378.1| PREDICTED: simila ( 749) 1467 298.4 2.4e-78 gi|118098874|ref|XP_001234535.1| PREDICTED: simila ( 731) 1466 298.2 2.7e-78 gi|73995264|ref|XP_534692.2| PREDICTED: similar to ( 710) 1465 298.0 3e-78 gi|194214273|ref|XP_001915013.1| PREDICTED: simila ( 619) 1464 297.7 3.1e-78 gi|66792525|gb|AAH96551.1| Tbx3 protein [Mus muscu ( 721) 1464 297.8 3.5e-78 gi|74178706|dbj|BAE34012.1| unnamed protein produc ( 721) 1464 297.8 3.5e-78 gi|149063472|gb|EDM13795.1| T-box 3, isoform CRA_c ( 598) 1462 297.3 4e-78 gi|148687838|gb|EDL19785.1| T-box 3, isoform CRA_a ( 577) 1460 296.9 5.1e-78 gi|194043003|ref|XP_001928032.1| PREDICTED: T-box ( 725) 1460 297.0 6.1e-78 gi|10720304|sp|O73718|TBX3_CHICK T-box transcripti ( 414) 1456 296.0 6.9e-78 gi|5931587|dbj|BAA84720.1| CpTbx2 [Cynops pyrrhoga ( 588) 1429 290.8 3.6e-76 gi|119571811|gb|EAW51426.1| T-box 2, isoform CRA_b ( 558) 1377 280.6 4.1e-73 gi|118100314|ref|XP_001235321.1| PREDICTED: simila ( 368) 1352 275.5 9.1e-72 >>gi|62088336|dbj|BAD92615.1| T-box 2 variant [Homo sapi (317 aa) initn: 2181 init1: 2181 opt: 2181 Z-score: 2326.2 bits: 438.6 E(): 6.3e-121 Smith-Waterman score: 2181; 100.000% identity (100.000% similar) in 317 aa overlap (1-317:1-317) 10 20 30 40 50 60 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGT 10 20 30 40 50 60 70 80 90 100 110 120 fh1860 EMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMP 70 80 90 100 110 120 130 140 150 160 170 180 fh1860 KRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDIL 130 140 150 160 170 180 190 200 210 220 230 240 fh1860 KLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPS 190 200 210 220 230 240 250 260 270 280 290 300 fh1860 LRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARGEGRTGGGTGRWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARGEGRTGGGTGRWG 250 260 270 280 290 300 310 fh1860 GRSSGRWAGLLLSHPLT ::::::::::::::::: gi|620 GRSSGRWAGLLLSHPLT 310 >>gi|51338800|sp|Q13207|TBX2_HUMAN T-box transcription f (702 aa) initn: 2000 init1: 1970 opt: 1970 Z-score: 2097.1 bits: 397.4 E(): 3.6e-108 Smith-Waterman score: 1970; 98.630% identity (99.658% similar) in 292 aa overlap (1-292:54-345) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|513 QPSFFPALALPPGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 30 40 50 60 70 80 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 90 100 110 120 130 140 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 150 160 170 180 190 200 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 210 220 230 240 250 260 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP 270 280 290 300 310 320 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT :::::::::::::::::.: .. gi|513 PTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSEERAGAPLGRSPAPDSASPTRLTEP 330 340 350 360 370 380 >>gi|924928|gb|AAA73861.1| TBX2 [Homo sapiens] gi|15 (702 aa) initn: 2000 init1: 1970 opt: 1970 Z-score: 2097.1 bits: 397.4 E(): 3.6e-108 Smith-Waterman score: 1970; 98.630% identity (99.658% similar) in 292 aa overlap (1-292:54-345) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|924 QPSFFPALALPPGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 30 40 50 60 70 80 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|924 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 90 100 110 120 130 140 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|924 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 150 160 170 180 190 200 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|924 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 210 220 230 240 250 260 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|924 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP 270 280 290 300 310 320 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT :::::::::::::::::.: .. gi|924 PTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSEERARAPLGRSPAPDSASPTRLTEP 330 340 350 360 370 380 >>gi|119571809|gb|EAW51424.1| T-box 2, isoform CRA_a [Ho (712 aa) initn: 2000 init1: 1970 opt: 1970 Z-score: 2097.0 bits: 397.4 E(): 3.7e-108 Smith-Waterman score: 1970; 98.630% identity (99.658% similar) in 292 aa overlap (1-292:64-355) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|119 QPSFFPALALPPGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 40 50 60 70 80 90 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 100 110 120 130 140 150 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 160 170 180 190 200 210 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 220 230 240 250 260 270 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP 280 290 300 310 320 330 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT :::::::::::::::::.: .. gi|119 PTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSEERAGAPLGRSPAPDSASPTRLTEP 340 350 360 370 380 390 >>gi|50949481|emb|CAH10619.1| hypothetical protein [Homo (651 aa) initn: 2045 init1: 1961 opt: 1961 Z-score: 2088.0 bits: 395.6 E(): 1.2e-107 Smith-Waterman score: 1961; 98.288% identity (99.315% similar) in 292 aa overlap (1-292:3-294) 10 20 30 40 50 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 AAAAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKL 10 20 30 40 50 60 60 70 80 90 100 110 fh1860 GTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 GTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPE 70 80 90 100 110 120 120 130 140 150 160 170 fh1860 MPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 MPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND 130 140 150 160 170 180 180 190 200 210 220 230 fh1860 ILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|509 ILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRGTGNGRREKRKQLTL 190 200 210 220 230 240 240 250 260 270 280 290 fh1860 PSLRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARGEGRTGGGTGR :::::::::::::::::::::::::::::::::::::::::::::::::.: .. gi|509 PSLRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSD 250 260 270 280 290 300 300 310 fh1860 WGGRSSGRWAGLLLSHPLT gi|509 PEPERLSEERAGAPLGRSPAPDSASPTRLTEPERARERRSPERGKEPAESGGDGPFGLRS 310 320 330 340 350 360 >>gi|74143515|dbj|BAE28824.1| unnamed protein product [M (701 aa) initn: 2057 init1: 1958 opt: 1958 Z-score: 2084.4 bits: 395.0 E(): 1.9e-107 Smith-Waterman score: 1958; 97.611% identity (98.976% similar) in 293 aa overlap (1-293:54-346) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|741 QPSFFPALALPPGALGKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 30 40 50 60 70 80 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 90 100 110 120 130 140 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 150 160 170 180 190 200 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 210 220 230 240 250 260 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|741 LKIDNNPFAKGFRDTGNGRREKRKQLTLPTLRLYEEHCKPERDGAESDASSCDPPPAREP 270 280 290 300 310 320 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT : ::.::::::::::::.: . : gi|741 PPSPSAAPSPLRLHRARAEEKPGAADSDPEPERTGEERSAAPLGRSPSRDASPARLTEPE 330 340 350 360 370 380 >>gi|2501116|sp|Q60707|TBX2_MOUSE T-box transcription fa (701 aa) initn: 2057 init1: 1958 opt: 1958 Z-score: 2084.4 bits: 395.0 E(): 1.9e-107 Smith-Waterman score: 1958; 97.611% identity (98.976% similar) in 293 aa overlap (1-293:54-346) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|250 QPSFFPALALPPGALGKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 30 40 50 60 70 80 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 90 100 110 120 130 140 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 150 160 170 180 190 200 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 210 220 230 240 250 260 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|250 LKIDNNPFAKGFRDTGNGRREKRKQLTLPTLRLYEEHCKPERDGAESDASSCDPPPAREP 270 280 290 300 310 320 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT : ::.::::::::::::.: . : gi|250 PPSPSAAPSPLRLHRARAEEKPGAADSDPEPERTGEERSAAPLCRSPSRDASPARLTEPE 330 340 350 360 370 380 >>gi|56205207|emb|CAI25161.1| T-box 2 [Mus musculus] (711 aa) initn: 2057 init1: 1958 opt: 1958 Z-score: 2084.3 bits: 395.0 E(): 1.9e-107 Smith-Waterman score: 1958; 97.611% identity (98.976% similar) in 293 aa overlap (1-293:64-356) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|562 QPSFFPALALPPGALGKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 40 50 60 70 80 90 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 100 110 120 130 140 150 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 160 170 180 190 200 210 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 220 230 240 250 260 270 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|562 LKIDNNPFAKGFRDTGNGRREKRKQLTLPTLRLYEEHCKPERDGAESDASSCDPPPAREP 280 290 300 310 320 330 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT : ::.::::::::::::.: . : gi|562 PPSPSAAPSPLRLHRARAEEKPGAADSDPEPERTGEERSAAPLGRSPSRDASPARLTEPE 340 350 360 370 380 390 >>gi|62511164|sp|Q863A2|TBX2_CANFA T-box transcription f (702 aa) initn: 1943 init1: 1943 opt: 1943 Z-score: 2068.4 bits: 392.1 E(): 1.4e-106 Smith-Waterman score: 1943; 92.880% identity (96.117% similar) in 309 aa overlap (1-309:54-362) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::::::::::::::: gi|625 QPSFFPALALPPGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLK 30 40 50 60 70 80 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 90 100 110 120 130 140 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 150 160 170 180 190 200 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 210 220 230 240 250 260 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|625 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPAPAREP 270 280 290 300 310 320 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGGGTGRWGGRSSGRWAGLLLSHPLT :.:::.:::::::::.:.. . .. . : : . :: gi|625 PASPGSAPSPLRLHRTRADEKCAADSDPEPERLSEERAGPALGRSPGLDGGSPPRLTEPE 330 340 350 360 370 380 gi|625 RARERRSPERGKEPAESGGDGPFGLRSLEKERAEARRKDDGRKEAGEGKEPGLAPLVVQT 390 400 410 420 430 440 >>gi|126307408|ref|XP_001362182.1| PREDICTED: similar to (715 aa) initn: 1989 init1: 1906 opt: 1906 Z-score: 2028.9 bits: 384.8 E(): 2.3e-104 Smith-Waterman score: 1907; 88.615% identity (91.385% similar) in 325 aa overlap (1-315:64-387) 10 20 30 fh1860 AAAAAAAAEAGLHVSALGPHPPAAHLRSLK :::::::::::::::::: :: :::::::: gi|126 QPSFFPALALPPAALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGHHPQAAHLRSLK 40 50 60 70 80 90 40 50 60 70 80 90 fh1860 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYIL 100 110 120 130 140 150 100 110 120 130 140 150 fh1860 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 160 170 180 190 200 210 160 170 180 190 200 210 fh1860 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQ 220 230 240 250 260 270 220 230 240 250 260 270 fh1860 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREP ::::::::::::::::::::::::::::::::.:::.::::::::::::::::::::::: gi|126 LKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRMYEEQCKPERDGAESDASSCDPPPAREP 280 290 300 310 320 330 280 290 300 310 fh1860 PTSPGAAPSPLRLHRARGEGRTGG----------GTGRWGGRSSGRWAGLLLSHPLT : :::. ::::::::.: . . . : : :: . :: :: . : gi|126 PPSPGTDPSPLRLHRSRVDEKLCAADSDPEPERLGDERPGG-TMGRSPGLEPASPPRLVE 340 350 360 370 380 390 gi|126 SERLRERRSPDRSKEPGEVGGCLDGPFGLRALEKDKAEGRRKDEARKEGSEVKETGLAPL 400 410 420 430 440 450 317 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 22:12:09 2008 done: Sat Aug 9 22:14:47 2008 Total Scan time: 736.150 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]