hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-22144863/chunk_1/iprscan-20080809-22144863.nocrc
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Query sequence: fh18602
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00425                                                 448.8   2.7e-130   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00425    1/1      41   229 ..     1   206 []   448.8 2.7e-130

Alignments of top-scoring domains:
SM00425: domain 1 of 1, from 41 to 229: score 448.8, E = 2.7e-130
                   *->gikVsLedskeLWkkFhelgTEMIvTKskGRRMFPtlkvkvsGLDPn
                      ++kV+Le  keLW++Fh+lgTEM++TKs GRRMFP +kv+vsGLD++
     fh18602    41    DPKVTLEA-KELWDQFHKLGTEMVITKS-GRRMFPPFKVRVSGLDKK 85   

                   alYsvlldlvpvDdkrhRYkFnnFngkWvvaGkaephlpdprvyvHPdSp
                   a+Y++l+d+v++Dd  +RYkF+n  ++W+vaGka+p++p +r+y+HPdSp
     fh18602    86 AKYILLMDIVAADD--CRYKFHN--SRWMVAGKADPEMP-KRMYIHPDSP 130  

                   atGahWMkqpVsFdKvKLTNnqldenghiqmIiLnSMHKYqPRlHivevd
                   atG++WM +pV F+K+KLTNn++d++g +   iLnSMHKYqPR+Hiv+++
     fh18602   131 ATGEQWMAKPVAFHKLKLTNNISDKHGFT---ILNSMHKYQPRFHIVRAN 177  

                   desklypsqpsnqiplvktftFpETeFIaVTAYQNqkITkLKIdnNPFAK
                   d+ kl++s+       ++t++FpET FIaVTAYQN+kIT+LKIdnNPFAK
     fh18602   178 DILKLPYST-------FRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAK 220  

                   GFRdngrrr<-*
                   GFRd g +r   
     fh18602   221 GFRDTGNGR    229  

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