# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh18774.fasta.nr -Q fh18774.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh18774, 245 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6819977 sequences Expectation_n fit: rho(ln(x))= 5.7175+/-0.000187; mu= 6.7834+/- 0.010 mean_var=84.3337+/-16.274, 0's: 31 Z-trim: 42 B-trim: 0 in 0/66 Lambda= 0.139661 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088338|dbj|BAD92616.1| hypothetical protein D ( 245) 1614 334.2 1e-89 gi|114615180|ref|XP_519556.2| PREDICTED: hypotheti ( 649) 1300 271.2 2.5e-70 gi|74761931|sp|Q9UFC0.2|LRWD1_HUMAN Leucine-rich r ( 647) 1295 270.2 4.9e-70 gi|158255370|dbj|BAF83656.1| unnamed protein produ ( 647) 1295 270.2 4.9e-70 gi|109066206|ref|XP_001108941.1| PREDICTED: simila ( 647) 1267 264.6 2.5e-68 gi|14495656|gb|AAH09436.1| LRWD1 protein [Homo sap ( 610) 1235 258.1 2e-66 gi|194218887|ref|XP_001492956.2| PREDICTED: leucin ( 642) 1117 234.3 3.1e-59 gi|73957790|ref|XP_536851.2| PREDICTED: similar to ( 732) 1112 233.4 6.8e-59 gi|26342296|dbj|BAC34810.1| unnamed protein produc ( 483) 969 204.4 2.3e-50 gi|81913636|sp|Q8BUI3.1|LRWD1_MOUSE Leucine-rich r ( 648) 969 204.5 2.9e-50 gi|148687374|gb|EDL19321.1| RIKEN cDNA 1200011O22, ( 664) 969 204.5 3e-50 gi|146231880|gb|ABQ13015.1| hypothetical protein L ( 361) 941 198.7 9.2e-49 gi|17511840|gb|AAH18769.1| LRWD1 protein [Homo sap ( 556) 868 184.1 3.5e-44 gi|126314492|ref|XP_001378748.1| PREDICTED: hypoth ( 689) 641 138.5 2.4e-30 gi|51859297|gb|AAH81940.1| Similar to hypothetical ( 416) 591 128.2 1.7e-27 gi|118100091|ref|XP_415759.2| PREDICTED: similar t ( 749) 577 125.6 2e-26 gi|166796177|gb|AAI59055.1| Unknown (protein for M ( 691) 503 110.7 5.7e-22 gi|82236429|sp|Q6GM71.1|LRWD1_XENLA Leucine-rich r ( 722) 496 109.3 1.6e-21 gi|109066208|ref|XP_001108895.1| PREDICTED: hypoth ( 495) 464 102.7 1e-19 gi|116487499|gb|AAI25815.1| Lrwd1 protein [Danio r ( 528) 436 97.1 5.3e-18 gi|169146286|emb|CAQ13767.1| novel protein (wu:ft3 ( 763) 436 97.2 7.1e-18 gi|63100690|gb|AAH95309.1| Lrwd1 protein [Danio re ( 769) 436 97.2 7.1e-18 gi|189519577|ref|XP_683313.3| PREDICTED: leucine-r ( 787) 436 97.2 7.3e-18 gi|47214666|emb|CAG00902.1| unnamed protein produc ( 732) 406 91.1 4.5e-16 gi|115643103|ref|XP_001191314.1| PREDICTED: simila (1207) 335 77.0 1.4e-11 gi|149631754|ref|XP_001516556.1| PREDICTED: hypoth ( 152) 320 73.3 2.1e-11 gi|149569627|ref|XP_001507912.1| PREDICTED: hypoth ( 158) 320 73.4 2.2e-11 gi|156226658|gb|EDO47466.1| predicted protein [Nem ( 631) 275 64.7 3.6e-08 >>gi|62088338|dbj|BAD92616.1| hypothetical protein DKFZp (245 aa) initn: 1614 init1: 1614 opt: 1614 Z-score: 1765.9 bits: 334.2 E(): 1e-89 Smith-Waterman score: 1614; 100.000% identity (100.000% similar) in 245 aa overlap (1-245:1-245) 10 20 30 40 50 60 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLETLPDNLGLSHLRVLRCANNQLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLETLPDNLGLSHLRVLRCANNQLG 10 20 30 40 50 60 70 80 90 100 110 120 fh1877 DVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLRKVNGKDASSTYSQVENLNRELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLRKVNGKDASSTYSQVENLNRELT 70 80 90 100 110 120 130 140 150 160 170 180 fh1877 SRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYGPESLSEFTQWRVRMISEELVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYGPESLSEFTQWRVRMISEELVAA 130 140 150 160 170 180 190 200 210 220 230 240 fh1877 SRTQVQKANSPEKPPEAGAAHKPRVSAAPRALRPAQSLLPGEASGDQGVLGMCPGSTPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRTQVQKANSPEKPPEAGAAHKPRVSAAPRALRPAQSLLPGEASGDQGVLGMCPGSTPGP 190 200 210 220 230 240 fh1877 GSLPR ::::: gi|620 GSLPR >>gi|114615180|ref|XP_519556.2| PREDICTED: hypothetical (649 aa) initn: 1294 init1: 1294 opt: 1300 Z-score: 1417.9 bits: 271.2 E(): 2.5e-70 Smith-Waterman score: 1300; 87.449% identity (89.879% similar) in 247 aa overlap (6-244:28-269) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::::::::::::::::::::::::::::::: gi|114 MGPLSARLLMQRGRPKSDRLGKIRSLDLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG 130 140 150 160 170 180 160 170 180 190 200 210 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAAPRAL-RPAQ- ::::::::::::::::::::::::::::::::::::::::::::::. : :: :: . gi|114 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRARLA--ALKRPDDV 190 200 210 220 230 220 230 240 fh1877 --SLLPGE---ASGDQGVLGMCPGSTPGP-GSLPR :: :.. :: . : : : . : :: : gi|114 PLSLSPSKRACASPSAQVEG---GPVAGSDGSQPAMKLEPLHFLQCHSKNNSPQDLETQL 240 250 260 270 280 290 gi|114 WACAFEPAWEEGTWGTSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTALMVV 300 310 320 330 340 350 >>gi|74761931|sp|Q9UFC0.2|LRWD1_HUMAN Leucine-rich repea (647 aa) initn: 1294 init1: 1294 opt: 1295 Z-score: 1412.5 bits: 270.2 E(): 4.9e-70 Smith-Waterman score: 1297; 86.008% identity (89.300% similar) in 243 aa overlap (6-238:28-269) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::::::::::::::::::::::::::::::: gi|747 MGPLSARLLMQRGRPKSDRLGKIRSLDLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG 130 140 150 160 170 180 160 170 180 190 200 210 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAA--------PR ::::::::::::::::::::::::::::::::::::::::::::::. : : gi|747 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRARLAALKRPDDVPL 190 200 210 220 230 240 220 230 240 fh1877 ALRPAQSLLPGEASGDQG--VLGMCPGSTPGPGSLPR .: :.. . .. .: : : :: : gi|747 SLSPSKRACASPSAQVEGSPVAG-SDGSQPAVKLEPLHFLQCHSKNNSPQDLETQLWACA 250 260 270 280 290 >>gi|158255370|dbj|BAF83656.1| unnamed protein product [ (647 aa) initn: 1294 init1: 1294 opt: 1295 Z-score: 1412.5 bits: 270.2 E(): 4.9e-70 Smith-Waterman score: 1297; 86.008% identity (89.300% similar) in 243 aa overlap (6-238:28-269) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::::::::::::::::::::::::::::::: gi|158 MGPLSARLLMQRGRPKSDRLGKIRSLDLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG 130 140 150 160 170 180 160 170 180 190 200 210 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAA--------PR ::::::::::::::::::::::::::::::::::::::::::::::. : : gi|158 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRARLAALKRPDDVPL 190 200 210 220 230 240 220 230 240 fh1877 ALRPAQSLLPGEASGDQG--VLGMCPGSTPGPGSLPR .: :.. . .. .: : : :: : gi|158 SLSPSKRACASPSAQVEGSPVAG-SDGSQPAVKLEPLHFLQCHSKNNSPQDLETQLWACA 250 260 270 280 290 >>gi|109066206|ref|XP_001108941.1| PREDICTED: similar to (647 aa) initn: 1265 init1: 1265 opt: 1267 Z-score: 1382.0 bits: 264.6 E(): 2.5e-68 Smith-Waterman score: 1267; 83.884% identity (89.256% similar) in 242 aa overlap (6-238:28-269) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::::::::::::::::::::::::::::.:: gi|109 MGPLSARLLMQRGRPKSDRLGKIRSLDLSGLELLSEHLDPKLLCRLTQLQELDLSNNQLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG 130 140 150 160 170 180 160 170 180 190 200 210 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAA--------PR :::::::::::::::::::::.:::::..:.:::::::::::::::. : : gi|109 PESLSEFTQWRVRMISEELVASSRTQVHEADSPEKPPEAGAAHKPRARLAALKRPDDVPL 190 200 210 220 230 240 220 230 240 fh1877 ALRPAQSLLPGE-ASGDQGVLGMCPGSTPGPGSLPR : :.. . :. . : .. :: : gi|109 NLSPSKRACASPSAQVEGGPVAGSDGSQPALKLEPLHFLQCHSKNNSPQDLETQLWACAF 250 260 270 280 290 300 >>gi|14495656|gb|AAH09436.1| LRWD1 protein [Homo sapiens (610 aa) initn: 1234 init1: 1234 opt: 1235 Z-score: 1347.5 bits: 258.1 E(): 2e-66 Smith-Waterman score: 1237; 85.408% identity (88.841% similar) in 233 aa overlap (16-238:1-232) 10 20 30 40 50 60 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLETLPDNLGLSHLRVLRCANNQLG ::::::::::::::::::::::::::::::::::::::::::::: gi|144 LDPKLLCRLTQLQELDLSNNHLETLPDNLGLSHLRVLRCANNQLG 10 20 30 40 70 80 90 100 110 120 fh1877 DVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLRKVNGKDASSTYSQVENLNRELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 DVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLRKVNGKDASSTYSQVENLNRELT 50 60 70 80 90 100 130 140 150 160 170 180 fh1877 SRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYGPESLSEFTQWRVRMISEELVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 SRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYGPESLSEFTQWRVRMISEELVAA 110 120 130 140 150 160 190 200 210 220 230 fh1877 SRTQVQKANSPEKPPEAGAAHKPRVSAA--------PRALRPAQSLLPGEASGDQG--VL ::::::::::::::::::::::::. : : .: :.. . .. .: : gi|144 SRTQVQKANSPEKPPEAGAAHKPRARLAALKRPDDVPLSLSPSKRACASPSAQVEGSPVA 170 180 190 200 210 220 240 fh1877 GMCPGSTPGPGSLPR : :: : gi|144 G-SDGSQPAVKLEPLHFLQCHSKNNSPQDLETQLWACAFEPAWEEGATSQTVATCGGEAV 230 240 250 260 270 280 >>gi|194218887|ref|XP_001492956.2| PREDICTED: leucine-ri (642 aa) initn: 1101 init1: 1101 opt: 1117 Z-score: 1218.7 bits: 234.3 E(): 3.1e-59 Smith-Waterman score: 1117; 75.203% identity (84.959% similar) in 246 aa overlap (6-244:28-271) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::.:.::::::::: :::::::::::::.:: gi|194 MGPLSARLLMQRGRPKSDRLGKIQSLDLSGLKLFSEHLDPKLLSRLTQLQELDLSNNQLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR ::: ::::::::.::::::::::::.:::::.::::::::::::::.:::::::::: :: gi|194 TLPANLGLSHLRILRCANNQLGDVTTLCQFPQLEELSLEGNPFLTVSDNLKVSFLLPKLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG :::::::::: ::::.::::::::::::::::::::.::::::::: :::.::.:::::: gi|194 KVNGKDASSTSSQVESLNRELTSRVTAHWEKFMATLSPEEEAEKAQEDFVRSAIRDVRYG 130 140 150 160 170 180 160 170 180 190 200 210 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAAPRAL-RPAQ- :::::::::::::::::::::.: ::..:.: :.: .: ::..:: : : :: :: . gi|194 PESLSEFTQWRVRMISEELVASSGIQVHEADSLERPSKATAAQEPR--AKPGALKRPDDV 190 200 210 220 230 220 230 240 fh1877 --SLLPGEASGDQGVLGMCPGST---PGPGSLPR .: :.. : : :: :.: : gi|194 PLNLSPNKRVCTAPVEGSPVGSDDSQPAPKLEPLHFLQCHSKNNSPRDLETQLWACAFEP 240 250 260 270 280 290 gi|194 AWEEGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTALMVVTQAGHKKRW 300 310 320 330 340 350 >>gi|73957790|ref|XP_536851.2| PREDICTED: similar to C56 (732 aa) initn: 771 init1: 771 opt: 1112 Z-score: 1212.4 bits: 233.4 E(): 6.8e-59 Smith-Waterman score: 1112; 77.593% identity (86.722% similar) in 241 aa overlap (6-238:117-353) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNN ::::.::::::::::: :: :::::::::: gi|739 LLAMGPLSARLLMQRGRPKSDRLGKIRSLDLSGLKLLSEHLDPKLLSRLKQLQELDLSNN 90 100 110 120 130 140 40 50 60 70 80 90 fh1877 HLETLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLP .::::: :::::::::::::::::::::::::::.::::::::::::::.:::::::::: gi|739 QLETLPANLGLSHLRVLRCANNQLGDVTALCQFPQLEELSLEGNPFLTVSDNLKVSFLLP 150 160 170 180 190 200 100 110 120 130 140 150 fh1877 TLRKVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDV :::::::::::: ::::::::::::::::::::: :.:.::: :::::::::.:::::: gi|739 KLRKVNGKDASSTCSQVENLNRELTSRVTAHWEKFKAALSPEE-AEKAQADFVRSAVRDV 210 220 230 240 250 260 160 170 180 190 200 210 fh1877 RYGPESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPRVSAAPRAL-RP ::::::::::::::::::::::::.. ::..:. ::.::.: ::..:: : : :: :: gi|739 RYGPESLSEFTQWRVRMISEELVASGGIQVREADVPERPPKATAAREPR--AKPVALKRP 270 280 290 300 310 320 220 230 240 fh1877 AQ---SLLPGE----ASGDQGVLGMCPGSTPGPGSLPR . :: :.. .:.. : : :: : gi|739 DDTPLSLSPNKRVCTSSSSAHVEG-SDGSQPTLEPLHFLQCHSKNNSPRDLETQLWACAF 330 340 350 360 370 380 gi|739 EPAWEEGQAGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTALTVVTQAG 390 400 410 420 430 440 >>gi|26342296|dbj|BAC34810.1| unnamed protein product [M (483 aa) initn: 1025 init1: 963 opt: 969 Z-score: 1059.3 bits: 204.4 E(): 2.3e-50 Smith-Waterman score: 978; 66.397% identity (81.781% similar) in 247 aa overlap (6-234:28-274) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::.::::::::.:: :: .:.::::::: :: gi|263 MAPLTPQLLLQRGRPKTDKLGKIQSLNLSGLQLLSEHLDPNLLGRLKKLRELDLSNNLLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR ::: ::::::::.:::.:::::::::: :::.::::.:::::::::.:::::::::: :: gi|263 TLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLKVSFLLPKLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG ::::::..:: ::::::.::: .::::::.::.::..::::..:..:::..:::::: :: gi|263 KVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMRSAVRDVCYG 130 140 150 160 170 180 160 170 180 190 200 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPR-------------V :::: ::::::::::.:::::.. .::: :. : . :.:..: : : : gi|263 PESLIEFTQWRVRMIAEELVASGGAQVQDAKVPVEHPQAAGASKFRAREVASKRPGKDPV 190 200 210 220 230 240 210 220 230 240 fh1877 SAAP----RALRPAQSL-LPGEASGDQGVLGMCPGSTPGPGSLPR . : ::: :::. : :.: :..: . : gi|263 TLPPSKRVRALPPAQAEGSPMGADGGQAALHLEPLHFLQCHSRNNSPKDLETQLWACAFE 250 260 270 280 290 300 gi|263 PAREEGHSRATSQTVATCGGEAVCVIDCQTGLVLHKYKVPGEEFFSVAWTALTVVTQAGH 310 320 330 340 350 360 >>gi|81913636|sp|Q8BUI3.1|LRWD1_MOUSE Leucine-rich repea (648 aa) initn: 1021 init1: 963 opt: 969 Z-score: 1057.5 bits: 204.5 E(): 2.9e-50 Smith-Waterman score: 978; 66.397% identity (81.781% similar) in 247 aa overlap (6-234:28-274) 10 20 30 fh1877 EPGSGLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLE ::::.::::::::.:: :: .:.::::::: :: gi|819 MAPLTPQLLLQRGRPKTDKLGKIQSLNLSGLQLLSEHLDPNLLGRLKKLRELDLSNNLLE 10 20 30 40 50 60 40 50 60 70 80 90 fh1877 TLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLR ::: ::::::::.:::.:::::::::: :::.::::.:::::::::.:::::::::: :: gi|819 TLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLKVSFLLPKLR 70 80 90 100 110 120 100 110 120 130 140 150 fh1877 KVNGKDASSTYSQVENLNRELTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYG ::::::..:: ::::::.::: .::::::.::.::..::::..:..:::..:::::: :: gi|819 KVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMRSAVRDVCYG 130 140 150 160 170 180 160 170 180 190 200 fh1877 PESLSEFTQWRVRMISEELVAASRTQVQKANSPEKPPEAGAAHKPR-------------V :::: ::::::::::.:::::.. .::: :. : . :.:..: : : : gi|819 PESLIEFTQWRVRMIAEELVASGGAQVQDAKVPVEHPQAAGASKFRAREVASKRPGKDPV 190 200 210 220 230 240 210 220 230 240 fh1877 SAAP----RALRPAQSL-LPGEASGDQGVLGMCPGSTPGPGSLPR . : ::: :::. : :.: :..: . : gi|819 TLPPSKRVRALPPAQAEGSPMGADGGQAALHLEPLHFLQCHSRNNSPKDLETQLWACAFE 250 260 270 280 290 300 gi|819 PAREEGHSRATSQTVATCGGEAVCVIDCQTGLVLHKYKVPGEEFFSVAWTALTVVTQAGH 310 320 330 340 350 360 245 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 22:24:44 2008 done: Sat Aug 9 22:27:30 2008 Total Scan time: 688.390 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]