hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080809/iprscan-20080809-22273158/chunk_1/iprscan-20080809-22273158.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fh18774 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00369 30.0 0.00032 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00369 1/1 24 47 .. 1 24 [] 30.0 0.00032 Alignments of top-scoring domains: SM00369: domain 1 of 1, from 24 to 47: score 30.0, E = 0.00032 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L++L+eLdLsnN+L++LP+++ + fh18774 24 LTQLQELDLSNNHLETLPDNLGLS 47 //