# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh19224.fasta.nr -Q fh19224.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh19224, 477 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8982735 sequences Expectation_n fit: rho(ln(x))= 4.7018+/-0.000181; mu= 13.4806+/- 0.010 mean_var=63.8890+/-12.379, 0's: 32 Z-trim: 57 B-trim: 0 in 0/65 Lambda= 0.160458 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Ga ( 473) 3163 741.0 1.8e-211 gi|109080419|ref|XP_001109118.1| PREDICTED: gamma- ( 473) 3158 739.8 3.9e-211 gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid ( 473) 3154 738.9 7.4e-211 gi|114656020|ref|XP_510254.2| PREDICTED: gamma-ami ( 475) 3145 736.8 3.2e-210 gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Ga ( 473) 3108 728.3 1.2e-207 gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 p ( 473) 3106 727.8 1.6e-207 gi|126337134|ref|XP_001362985.1| PREDICTED: simila ( 473) 3103 727.1 2.7e-207 gi|148689912|gb|EDL21859.1| gamma-aminobutyric aci ( 472) 3101 726.6 3.7e-207 gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos ( 472) 3092 724.6 1.6e-206 gi|149691051|ref|XP_001493098.1| PREDICTED: gamma- ( 473) 3068 719.0 7.3e-205 gi|12548788|ref|NP_068712.1| gamma-aminobutyric ac ( 473) 2979 698.4 1.2e-198 gi|55725861|emb|CAH89710.1| hypothetical protein [ ( 473) 2974 697.2 2.6e-198 gi|109080417|ref|XP_001109060.1| PREDICTED: gamma- ( 473) 2974 697.2 2.6e-198 gi|189067536|dbj|BAG37715.1| unnamed protein produ ( 473) 2972 696.8 3.6e-198 gi|51491195|emb|CAH18663.1| hypothetical protein [ ( 529) 2972 696.8 3.9e-198 gi|109080421|ref|XP_001108947.1| PREDICTED: gamma- ( 474) 2935 688.2 1.4e-195 gi|149031468|gb|EDL86448.1| gamma-aminobutyric aci ( 473) 2928 686.6 4.2e-195 gi|26350247|dbj|BAC38763.1| unnamed protein produc ( 473) 2927 686.4 4.9e-195 gi|53765741|gb|AAU93411.1| testis gamma-aminobutyr ( 471) 2920 684.7 1.5e-194 gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Ga ( 476) 2908 682.0 1e-193 gi|194206378|ref|XP_001493125.2| PREDICTED: gamma- ( 473) 2888 677.3 2.6e-192 gi|134025815|gb|AAI36050.1| Gabrb3 protein [Xenopu ( 475) 2785 653.5 3.9e-185 gi|149635199|ref|XP_001505697.1| PREDICTED: simila ( 468) 2755 646.5 4.7e-183 gi|73950995|ref|XP_848482.1| PREDICTED: similar to ( 536) 2731 641.0 2.4e-181 gi|119578058|gb|EAW57654.1| gamma-aminobutyric aci ( 409) 2710 636.1 5.8e-180 gi|224042998|ref|XP_002194694.1| PREDICTED: gamma- ( 674) 2709 636.0 9.9e-180 gi|189520298|ref|XP_695300.3| PREDICTED: similar t ( 471) 2681 629.4 6.8e-178 gi|189099244|gb|ACD76859.1| gamma-aminobutyric aci ( 408) 2654 623.1 4.6e-176 gi|119578059|gb|EAW57655.1| gamma-aminobutyric aci ( 402) 2613 613.6 3.3e-173 gi|109080423|ref|XP_001109005.1| PREDICTED: gamma- ( 410) 2610 612.9 5.4e-173 gi|221040640|dbj|BAH11997.1| unnamed protein produ ( 402) 2595 609.5 5.9e-172 gi|221044268|dbj|BAH13811.1| unnamed protein produ ( 388) 2574 604.6 1.7e-170 gi|542693|pir||JH0829 gamma-aminobutyric acid A re ( 474) 2564 602.3 9.7e-170 gi|47214122|emb|CAG01380.1| unnamed protein produc ( 450) 2554 600.0 4.6e-169 gi|1346080|sp|P47870.1|GBRB2_HUMAN RecName: Full=G ( 474) 2552 599.6 6.6e-169 gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Ga ( 474) 2552 599.6 6.6e-169 gi|73953537|ref|XP_867070.1| PREDICTED: similar to ( 474) 2550 599.1 9.2e-169 gi|158260483|dbj|BAF82419.1| unnamed protein produ ( 474) 2543 597.5 2.8e-168 gi|149726130|ref|XP_001503453.1| PREDICTED: gamma- ( 474) 2542 597.2 3.3e-168 gi|73953551|ref|XP_867140.1| PREDICTED: similar to ( 476) 2539 596.6 5.4e-168 gi|114603230|ref|XP_001143814.1| PREDICTED: gamma- ( 476) 2538 596.3 6.3e-168 gi|126290726|ref|XP_001369908.1| PREDICTED: simila ( 474) 2536 595.9 8.7e-168 gi|73953545|ref|XP_867113.1| PREDICTED: similar to ( 478) 2536 595.9 8.7e-168 gi|134026224|gb|AAI36090.1| LOC100125027 protein [ ( 474) 2530 594.5 2.3e-167 gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full ( 472) 2520 592.2 1.1e-166 gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Ga ( 474) 2501 587.8 2.4e-165 gi|126331665|ref|XP_001364516.1| PREDICTED: simila ( 475) 2480 582.9 6.9e-164 gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamm ( 474) 2475 581.7 1.5e-163 gi|73953541|ref|XP_867091.1| PREDICTED: similar to ( 472) 2474 581.5 1.8e-163 gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=G ( 474) 2472 581.0 2.5e-163 >>gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma- (473 aa) initn: 3163 init1: 3163 opt: 3163 Z-score: 3954.1 bits: 741.0 E(): 1.8e-211 Smith-Waterman score: 3163; 100.000% identity (100.000% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 MWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|109080419|ref|XP_001109118.1| PREDICTED: gamma-amin (473 aa) initn: 3158 init1: 3158 opt: 3158 Z-score: 3947.8 bits: 739.8 E(): 3.9e-211 Smith-Waterman score: 3158; 99.577% identity (100.000% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL :::::::::::::::::::::::::.::.::::::::::::::::::::::::::::::: gi|109 ESNRVDAHGNILLTSLEVHNEMNEVAGGVGDTRNSAISFDNSGIQYRKQSMPREGHGRFL 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GA (473 aa) initn: 3154 init1: 3154 opt: 3154 Z-score: 3942.8 bits: 738.9 E(): 7.4e-211 Smith-Waterman score: 3154; 99.789% identity (99.789% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 MWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|147 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDELNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobu (475 aa) initn: 2408 init1: 2408 opt: 3145 Z-score: 3931.5 bits: 736.8 E(): 3.2e-210 Smith-Waterman score: 3145; 99.368% identity (99.579% similar) in 475 aa overlap (5-477:1-475) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 fh1922 ESNRV--DAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGR ::::: ::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|114 ESNRVQVDAHGNILLTSLEVHNEMNEVAGGIGDTRNSAISFDNSGIQYRKQSMPREGHGR 360 370 380 390 400 410 420 430 440 450 460 470 fh1922 FLGDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FLGDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma- (473 aa) initn: 3108 init1: 3108 opt: 3108 Z-score: 3885.3 bits: 728.3 E(): 1.2e-207 Smith-Waterman score: 3108; 97.252% identity (99.577% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 MWGFAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL : :::::::::::. ..::::::::.:..:::::::::::::::::::::::.:::::.. gi|520 EINRVDAHGNILLAPMDVHNEMNEVAGSVGDTRNSAISFDNSGIQYRKQSMPKEGHGRYM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|520 GDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 prepr (473 aa) initn: 3106 init1: 3106 opt: 3106 Z-score: 3882.8 bits: 727.8 E(): 1.6e-207 Smith-Waterman score: 3106; 97.040% identity (99.577% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 MWGFAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|578 FRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL : :::::::::::. ..::::::::.:..:::::::::::::::::::::::.:::::.. gi|578 EINRVDAHGNILLAPMDVHNEMNEVAGSVGDTRNSAISFDNSGIQYRKQSMPKEGHGRYM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|578 GDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|126337134|ref|XP_001362985.1| PREDICTED: similar to (473 aa) initn: 3103 init1: 3103 opt: 3103 Z-score: 3879.0 bits: 727.1 E(): 2.7e-207 Smith-Waterman score: 3103; 96.406% identity (99.789% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MWGFAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|126 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::.::::::::::::::::::::::.::::::::::::::: gi|126 LEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEHRLVSKNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::.:.:::::::: gi|126 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKSARAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL :.:::::::::::::::.:::.:::.::.::.:::::::::::::::::::::::::: . gi|126 ETNRVDAHGNILLTSLEIHNEVNEVTGGVGDSRNSAISFDNSGIQYRKQSMPREGHGRHM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN :::..::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|126 GDRNIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLIYWLYYVN 420 430 440 450 460 470 >>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (G (472 aa) initn: 3101 init1: 3101 opt: 3101 Z-score: 3876.5 bits: 726.6 E(): 3.7e-207 Smith-Waterman score: 3101; 97.246% identity (99.576% similar) in 472 aa overlap (6-477:1-472) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF ::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WGFAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL : :::::::::::. ..::::::::.:..:::::::::::::::::::::::.:::::.. gi|148 EINRVDAHGNILLAPMDVHNEMNEVAGSVGDTRNSAISFDNSGIQYRKQSMPKEGHGRYM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos tau (472 aa) initn: 3090 init1: 2726 opt: 3092 Z-score: 3865.3 bits: 724.6 E(): 1.6e-206 Smith-Waterman score: 3092; 97.463% identity (99.366% similar) in 473 aa overlap (5-477:1-472) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::.::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|146 MWGFAGGRFFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::. gi|146 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKNAKAKNDRSKG 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL .::::::::::::::::::::::::.::.::::::: ::::::::::::::::::::: . gi|146 DSNRVDAHGNILLTSLEVHNEMNEVAGGVGDTRNSARSFDNSGIQYRKQSMPREGHGRHM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN :::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 -DRSVPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 >>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-amin (473 aa) initn: 3068 init1: 3068 opt: 3068 Z-score: 3835.2 bits: 719.0 E(): 7.3e-205 Smith-Waterman score: 3068; 96.617% identity (98.731% similar) in 473 aa overlap (5-477:1-473) 10 20 30 40 50 60 fh1922 RGGGMWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF :::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MWGFAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDF 10 20 30 40 50 70 80 90 100 110 120 fh1922 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQL 60 70 80 90 100 110 130 140 150 160 170 180 fh1922 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 120 130 140 150 160 170 190 200 210 220 230 240 fh1922 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLS 180 190 200 210 220 230 250 260 270 280 290 300 fh1922 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET 240 250 260 270 280 290 310 320 330 340 350 360 fh1922 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKS 300 310 320 330 340 350 370 380 390 400 410 420 fh1922 ESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGIQYRKQSMPREGHGRFL :::.::: ::::::.:.::::::.:.:. : .::: :::::::::::::::: ::::: . gi|149 ESNKVDADGNILLTTLDVHNEMNKVTGSGGAARNSPISFDNSGIQYRKQSMPMEGHGRHM 360 370 380 390 400 410 430 440 450 460 470 fh1922 GDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 420 430 440 450 460 470 477 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 08:51:42 2009 done: Thu Jun 18 08:54:48 2009 Total Scan time: 1123.790 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]