# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh19272.fasta.nr -Q fh19272.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh19272, 184 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6817300 sequences Expectation_n fit: rho(ln(x))= 5.3536+/-0.000184; mu= 7.6235+/- 0.010 mean_var=76.8981+/-14.925, 0's: 32 Z-trim: 75 B-trim: 334 in 1/65 Lambda= 0.146257 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|119583152|gb|EAW62748.1| cell cycle related kin ( 338) 743 165.3 7.1e-39 gi|109112073|ref|XP_001086854.1| PREDICTED: simila ( 338) 715 159.4 4.3e-37 gi|119583151|gb|EAW62747.1| cell cycle related kin ( 167) 659 147.4 8.9e-34 gi|119583149|gb|EAW62745.1| cell cycle related kin ( 185) 659 147.4 9.6e-34 gi|119583147|gb|EAW62743.1| cell cycle related kin ( 212) 659 147.5 1.1e-33 gi|58761265|gb|AAW82349.1| cell cycle-related kina ( 243) 659 147.5 1.2e-33 gi|12803641|gb|AAH02655.1| CCRK protein [Homo sapi ( 275) 659 147.6 1.3e-33 gi|55662773|emb|CAH72843.1| cell cycle related kin ( 325) 659 147.6 1.5e-33 gi|74759739|sp|Q8IZL9|CCRK_HUMAN Cell cycle-relate ( 346) 659 147.6 1.6e-33 gi|7259467|gb|AAF43778.1|AF113130_1 cyclin-depende ( 452) 658 147.5 2.2e-33 gi|75070084|sp|Q5EDC3|CCRK_MACMU Cell cycle-relate ( 243) 650 145.6 4.5e-33 gi|109112075|ref|XP_001086961.1| PREDICTED: simila ( 243) 643 144.1 1.2e-32 gi|109112071|ref|XP_001087202.1| PREDICTED: simila ( 346) 643 144.3 1.6e-32 gi|73946737|ref|XP_861570.1| PREDICTED: similar to ( 338) 636 142.8 4.5e-32 gi|75070591|sp|Q5R7I7.1|CCRK_PONAB Cell cycle-rela ( 346) 631 141.7 9.5e-32 gi|73946739|ref|XP_861601.1| PREDICTED: similar to ( 325) 627 140.9 1.6e-31 gi|68534301|gb|AAH98838.1| Cell cycle related kina ( 188) 624 140.1 1.6e-31 gi|73946741|ref|XP_533555.2| PREDICTED: similar to ( 346) 627 140.9 1.7e-31 gi|149029157|gb|EDL84442.1| cell cycle related kin ( 325) 624 140.2 2.5e-31 gi|148684296|gb|EDL16243.1| cell cycle related kin ( 325) 624 140.2 2.5e-31 gi|194041382|ref|XP_001927819.1| PREDICTED: simila ( 325) 624 140.2 2.5e-31 gi|84028813|sp|Q4KM34|CCRK_RAT Cell cycle-related ( 346) 624 140.2 2.6e-31 gi|117616778|gb|ABK42407.1| Ccrk [synthetic constr ( 346) 624 140.2 2.6e-31 gi|194041380|ref|XP_001927815.1| PREDICTED: simila ( 346) 624 140.2 2.6e-31 gi|81917471|sp|Q9JHU3|CCRK_MOUSE Cell cycle-relate ( 346) 624 140.2 2.6e-31 gi|148877465|gb|AAI46217.1| CCRK protein [Bos taur ( 346) 622 139.8 3.5e-31 gi|149614704|ref|XP_001507165.1| PREDICTED: simila ( 340) 620 139.4 4.7e-31 gi|126342767|ref|XP_001363337.1| PREDICTED: simila ( 325) 598 134.7 1.1e-29 gi|126342765|ref|XP_001363256.1| PREDICTED: simila ( 346) 598 134.8 1.2e-29 gi|149614702|ref|XP_001507125.1| PREDICTED: simila ( 324) 596 134.3 1.5e-29 gi|149614700|ref|XP_001507089.1| PREDICTED: simila ( 345) 596 134.3 1.6e-29 gi|159570378|emb|CAP19557.1| novel protein similar ( 344) 550 124.6 1.3e-26 gi|115964384|ref|XP_001204469.1| PREDICTED: hypoth ( 338) 509 116.0 5.2e-24 gi|115660790|ref|XP_799108.2| PREDICTED: hypotheti ( 346) 509 116.0 5.3e-24 gi|77748489|gb|AAI06519.1| MGC131269 protein [Xeno ( 340) 500 114.1 2e-23 gi|156229069|gb|EDO49865.1| predicted protein [Nem ( 347) 482 110.3 2.8e-22 gi|47203381|emb|CAG14499.1| unnamed protein produc ( 164) 373 87.0 1.3e-15 gi|190588976|gb|EDV28998.1| hypothetical protein T ( 267) 355 83.4 2.6e-14 gi|156546300|ref|XP_001606120.1| PREDICTED: simila ( 334) 317 75.5 8.1e-12 gi|147838772|emb|CAN60748.1| hypothetical protein ( 376) 312 74.4 1.8e-11 gi|157343630|emb|CAO68136.1| unnamed protein produ ( 422) 309 73.8 3.1e-11 gi|156104834|dbj|BAF75824.1| CDK activating kinase ( 411) 306 73.2 4.8e-11 gi|54287519|gb|AAV31263.1| putative cell division ( 279) 302 72.2 6.3e-11 gi|158512927|sp|A2Y4B6.1|CDKD1_ORYSI Cyclin-depend ( 424) 301 72.2 1e-10 gi|266410|sp|P29620.1|CDKD1_ORYSJ Cyclin-dependent ( 424) 299 71.7 1.4e-10 gi|157360018|emb|CAO68766.1| unnamed protein produ ( 347) 297 71.2 1.6e-10 gi|125594134|gb|EAZ34193.1| hypothetical protein O ( 506) 299 71.8 1.6e-10 gi|15419985|gb|AAK97227.1|AF302013_1 CDK-activatin ( 412) 297 71.3 1.8e-10 gi|75333588|sp|Q9C9U2|CDKD1_ARATH Cyclin-dependent ( 398) 289 69.6 5.6e-10 gi|8671788|gb|AAF78394.1|AC069551_27 T10O22.1 [Ara ( 146) 275 66.3 2e-09 >>gi|119583152|gb|EAW62748.1| cell cycle related kinase, (338 aa) initn: 743 init1: 743 opt: 743 Z-score: 853.0 bits: 165.3 E(): 7.1e-39 Smith-Waterman score: 743; 98.261% identity (99.130% similar) in 115 aa overlap (57-171:25-139) 30 40 50 60 70 80 fh1927 LDPRGGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLE .:::::: :::::::::::::::::::::: gi|119 MDQYCILGRIGEGAHGIVFKAKHVEPRVGWQCLPSILQTGEIVALKKVALRRLE 10 20 30 40 50 90 100 110 120 130 140 fh1927 DGFPNQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DGFPNQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQ 60 70 80 90 100 110 150 160 170 180 fh1927 AQVKSYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::::::: gi|119 AQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYT 120 130 140 150 160 170 >>gi|109112073|ref|XP_001086854.1| PREDICTED: similar to (338 aa) initn: 715 init1: 715 opt: 715 Z-score: 821.1 bits: 159.4 E(): 4.3e-37 Smith-Waterman score: 715; 97.345% identity (99.115% similar) in 113 aa overlap (59-171:27-139) 30 40 50 60 70 80 fh1927 PRGGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDG ::::: :::::::::::::::::::::::: gi|109 MDQYCILGRIGEGAHGIVFKAKHVEVRVGWQCLPSILQTGEIVALKKVALRRLEDG 10 20 30 40 50 90 100 110 120 130 140 fh1927 FPNQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQ .::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|109 IPNQALREIKALQEMEDNQYVVQLKAVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLAQAQ 60 70 80 90 100 110 150 160 170 180 fh1927 VKSYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::::: gi|109 VKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDSSRLYTHQ 120 130 140 150 160 170 >>gi|119583151|gb|EAW62747.1| cell cycle related kinase, (167 aa) initn: 657 init1: 657 opt: 659 Z-score: 761.6 bits: 147.4 E(): 8.9e-34 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|119 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|119 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|119583149|gb|EAW62745.1| cell cycle related kinase, (185 aa) initn: 657 init1: 657 opt: 659 Z-score: 760.9 bits: 147.4 E(): 9.6e-34 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|119 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|119 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVC 110 120 130 140 150 160 >>gi|119583147|gb|EAW62743.1| cell cycle related kinase, (212 aa) initn: 657 init1: 657 opt: 659 Z-score: 760.1 bits: 147.5 E(): 1.1e-33 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|119 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|119 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|58761265|gb|AAW82349.1| cell cycle-related kinase c (243 aa) initn: 657 init1: 657 opt: 659 Z-score: 759.3 bits: 147.5 E(): 1.2e-33 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|587 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|587 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|587 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|12803641|gb|AAH02655.1| CCRK protein [Homo sapiens] (275 aa) initn: 657 init1: 657 opt: 659 Z-score: 758.5 bits: 147.6 E(): 1.3e-33 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|128 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|128 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|55662773|emb|CAH72843.1| cell cycle related kinase (325 aa) initn: 657 init1: 657 opt: 659 Z-score: 757.5 bits: 147.6 E(): 1.5e-33 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|556 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|556 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|74759739|sp|Q8IZL9|CCRK_HUMAN Cell cycle-related ki (346 aa) initn: 657 init1: 657 opt: 659 Z-score: 757.1 bits: 147.6 E(): 1.6e-33 Smith-Waterman score: 659; 92.793% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..:::::::::::::::::::: gi|747 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|747 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 >>gi|7259467|gb|AAF43778.1|AF113130_1 cyclin-dependent p (452 aa) initn: 656 init1: 656 opt: 658 Z-score: 754.3 bits: 147.5 E(): 2.2e-33 Smith-Waterman score: 658; 91.892% identity (95.495% similar) in 111 aa overlap (61-171:16-126) 40 50 60 70 80 90 fh1927 GGPLAEPGARVSLSTTFPPPTFISLSQPRVGWQFLPSILQTGEIVALKKVALRRLEDGFP : : . ..::::.::::::::::::::: gi|725 MDQYCILGRIGEGAHGIVFKAKHVETGEIIALKKVALRRLEDGFP 10 20 30 40 100 110 120 130 140 150 fh1927 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|725 NQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVK 50 60 70 80 90 100 160 170 180 fh1927 SYLQMLLKGVAFCHANNIVHRVSLSIGRAWGLGS ::::::::::::::::::::: gi|725 SYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVA 110 120 130 140 150 160 184 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 22:51:19 2008 done: Sat Aug 9 22:54:14 2008 Total Scan time: 620.240 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]