hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-22541517/chunk_1/iprscan-20080809-22541517.nocrc
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Query sequence: fh19272
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00069.15.fs Protein kinase domain                           59.0    1.2e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      71   171 ..    23   133 ..    59.0  1.2e-16

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 71 to 171: score 59.0, E = 1.2e-16
                   *->tgkiVAvKiikkrkekskkdktarrlsEiqilkrL.sHpNIvrlidv
                      tg+iVA+K++ +r+ +++++ +a+r  Ei+ l+++++  ++v+l+ v
     fh19272    71    TGEIVALKKVALRRLEDGFPNQALR--EIKALQEMeDNQYVVQLKAV 115  

                   fedkdhlylVlEycegGLrvldLfdylsetrrkgpllfsedeakkialQi
                   f  ++   l +E++       dL ++++  ++++pl     ++k+++  +
     fh19272   116 FPHGGGFVLAFEFMLS-----DLAEVVR--HAQRPL--AQAQVKSYLQML 156  

                   lrgleYLHsngiiHR<-*
                   l+g++++H+n+i+HR   
     fh19272   157 LKGVAFCHANNIVHR    171  

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