# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh19454.fasta.nr -Q fh19454.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh19454, 505 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6821297 sequences Expectation_n fit: rho(ln(x))= 6.2755+/-0.000197; mu= 7.5994+/- 0.011 mean_var=116.1572+/-22.127, 0's: 41 Z-trim: 49 B-trim: 0 in 0/66 Lambda= 0.119001 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087206|dbj|BAD92050.1| RNA binding motif prot ( 505) 3334 583.2 4.9e-164 gi|13124794|sp|P52756|RBM5_HUMAN RNA-binding prote ( 815) 3289 575.6 1.5e-161 gi|114586983|ref|XP_001167117.1| PREDICTED: RNA bi ( 814) 3286 575.1 2.1e-161 gi|109039557|ref|XP_001103773.1| PREDICTED: RNA bi ( 815) 3286 575.1 2.1e-161 gi|149728630|ref|XP_001496627.1| PREDICTED: simila ( 815) 3277 573.6 6.2e-161 gi|73985445|ref|XP_861280.1| PREDICTED: similar to ( 568) 3269 572.1 1.2e-160 gi|1244404|gb|AAA99715.1| putative tumor suppresso ( 815) 3271 572.5 1.3e-160 gi|73985439|ref|XP_850319.1| PREDICTED: similar to ( 643) 3269 572.1 1.3e-160 gi|1613900|gb|AAB42216.1| partial CDS, human putat ( 698) 3264 571.3 2.6e-160 gi|116255985|sp|Q1RMU5|RBM5_BOVIN RNA-binding prot ( 815) 3246 568.2 2.5e-159 gi|149018576|gb|EDL77217.1| RNA binding motif prot ( 815) 3216 563.1 8.8e-158 gi|148689278|gb|EDL21225.1| RNA binding motif prot ( 658) 3214 562.7 9.5e-158 gi|148689279|gb|EDL21226.1| RNA binding motif prot ( 707) 3214 562.7 1e-157 gi|81902437|sp|Q91YE7|RBM5_MOUSE RNA-binding prote ( 815) 3214 562.7 1.1e-157 gi|109039569|ref|XP_001104965.1| PREDICTED: RNA bi ( 818) 3214 562.7 1.1e-157 gi|13278337|gb|AAH03988.1| Rbm5 protein [Mus muscu ( 520) 3197 559.7 6e-157 gi|74140859|dbj|BAE22042.1| unnamed protein produc ( 815) 3184 557.6 3.9e-156 gi|149413060|ref|XP_001508682.1| PREDICTED: simila (1033) 3116 546.0 1.5e-152 gi|126335837|ref|XP_001368163.1| PREDICTED: simila ( 817) 3094 542.1 1.8e-151 gi|114586973|ref|XP_001167558.1| PREDICTED: RNA bi ( 781) 3027 530.6 5e-148 gi|109039575|ref|XP_001105044.1| PREDICTED: RNA bi ( 740) 2723 478.4 2.5e-132 gi|114586979|ref|XP_001167452.1| PREDICTED: RNA bi ( 719) 2500 440.1 8e-121 gi|59809193|gb|AAH89976.1| Rbm5 protein [Rattus no ( 346) 2277 401.6 1.6e-109 gi|114586975|ref|XP_001167477.1| PREDICTED: RNA bi ( 756) 2206 389.7 1.3e-105 gi|89267462|emb|CAJ81574.1| RNA binding motif prot ( 831) 2070 366.3 1.5e-98 gi|116487718|gb|AAI26020.1| MGC154798 protein [Xen ( 833) 2063 365.1 3.5e-98 gi|134023691|gb|AAI35141.1| Rbm5 protein [Xenopus ( 838) 2037 360.7 7.7e-97 gi|109039572|ref|XP_001104893.1| PREDICTED: RNA bi ( 829) 1936 343.3 1.3e-91 gi|73985441|ref|XP_861224.1| PREDICTED: similar to ( 741) 1911 339.0 2.3e-90 gi|82795833|ref|XP_926058.1| PREDICTED: similar to ( 770) 1825 324.3 6.5e-86 gi|73985443|ref|XP_861250.1| PREDICTED: similar to ( 272) 1801 319.8 5.2e-85 gi|74006806|ref|XP_862401.1| PREDICTED: similar to ( 719) 1794 318.9 2.5e-84 gi|74006808|ref|XP_538013.2| PREDICTED: similar to (1004) 1781 316.8 1.5e-83 gi|31874030|emb|CAD97933.1| hypothetical protein [ ( 995) 1772 315.3 4.3e-83 gi|119920292|ref|XP_582084.3| PREDICTED: similar t ( 762) 1770 314.8 4.5e-83 gi|13111845|gb|AAH03089.1| RNA binding motif prote ( 852) 1770 314.9 4.9e-83 gi|57209331|emb|CAI41700.1| RNA binding motif prot ( 853) 1770 314.9 4.9e-83 gi|6807976|emb|CAB70731.1| hypothetical protein [H ( 542) 1767 314.2 5e-83 gi|119579687|gb|EAW59283.1| RNA binding motif prot ( 929) 1770 314.9 5.2e-83 gi|12644371|sp|P98175|RBM10_HUMAN RNA-binding prot ( 929) 1770 314.9 5.2e-83 gi|13278828|gb|AAH04181.1| RNA binding motif prote ( 930) 1770 314.9 5.2e-83 gi|119579690|gb|EAW59286.1| RNA binding motif prot ( 995) 1770 314.9 5.5e-83 gi|26354250|dbj|BAC40753.1| unnamed protein produc ( 853) 1762 313.5 1.3e-82 gi|74198465|dbj|BAE39715.1| unnamed protein produc ( 853) 1762 313.5 1.3e-82 gi|148668422|gb|EDL00746.1| RNA binding motif prot ( 858) 1762 313.5 1.3e-82 gi|74006804|ref|XP_862374.1| PREDICTED: similar to ( 401) 1757 312.3 1.3e-82 gi|74148972|dbj|BAE32161.1| unnamed protein produc ( 929) 1762 313.5 1.3e-82 gi|74219368|dbj|BAE26813.1| unnamed protein produc ( 930) 1762 313.5 1.3e-82 gi|13435594|gb|AAH04674.1| RNA binding motif prote ( 930) 1762 313.5 1.3e-82 gi|11134296|sp|P70501|RBM10_RAT RNA-binding protei ( 852) 1755 312.3 2.9e-82 >>gi|62087206|dbj|BAD92050.1| RNA binding motif protein (505 aa) initn: 3334 init1: 3334 opt: 3334 Z-score: 3100.2 bits: 583.2 E(): 4.9e-164 Smith-Waterman score: 3334; 100.000% identity (100.000% similar) in 505 aa overlap (1-505:1-505) 10 20 30 40 50 60 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGYAQ 10 20 30 40 50 60 70 80 90 100 110 120 fh1945 YAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEA 70 80 90 100 110 120 130 140 150 160 170 180 fh1945 QPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYYDPNSQYYYNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYYDPNSQYYYNS 130 140 150 160 170 180 190 200 210 220 230 240 fh1945 LTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKS 190 200 210 220 230 240 250 260 270 280 290 300 fh1945 LNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEEN 250 260 270 280 290 300 310 320 330 340 350 360 fh1945 PLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSD 310 320 330 340 350 360 370 380 390 400 410 420 fh1945 LHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGT 370 380 390 400 410 420 430 440 450 460 470 480 fh1945 VNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSA 430 440 450 460 470 480 490 500 fh1945 YGLSGADSYKDAVRKAMFARFTEME ::::::::::::::::::::::::: gi|620 YGLSGADSYKDAVRKAMFARFTEME 490 500 >>gi|13124794|sp|P52756|RBM5_HUMAN RNA-binding protein 5 (815 aa) initn: 3289 init1: 3289 opt: 3289 Z-score: 3055.6 bits: 575.6 E(): 1.5e-161 Smith-Waterman score: 3289; 99.203% identity (100.000% similar) in 502 aa overlap (4-505:314-815) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...::::::::::::::::::::::::: gi|131 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 770 780 790 800 810 >>gi|114586983|ref|XP_001167117.1| PREDICTED: RNA bindin (814 aa) initn: 3286 init1: 3286 opt: 3286 Z-score: 3052.8 bits: 575.1 E(): 2.1e-161 Smith-Waterman score: 3286; 99.004% identity (100.000% similar) in 502 aa overlap (4-505:313-814) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...::::::::::::::::::::::::: gi|114 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|114 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 770 780 790 800 810 >>gi|109039557|ref|XP_001103773.1| PREDICTED: RNA bindin (815 aa) initn: 3286 init1: 3286 opt: 3286 Z-score: 3052.8 bits: 575.1 E(): 2.1e-161 Smith-Waterman score: 3286; 99.004% identity (100.000% similar) in 502 aa overlap (4-505:314-815) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...::::::::::::::::::::::::: gi|109 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 770 780 790 800 810 >>gi|149728630|ref|XP_001496627.1| PREDICTED: similar to (815 aa) initn: 3277 init1: 3277 opt: 3277 Z-score: 3044.5 bits: 573.6 E(): 6.2e-161 Smith-Waterman score: 3277; 98.606% identity (99.801% similar) in 502 aa overlap (4-505:314-815) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...:::: :::::::::::::::::::: gi|149 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 WKKMACLLCRRQFPNRDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 770 780 790 800 810 >>gi|73985445|ref|XP_861280.1| PREDICTED: similar to RNA (568 aa) initn: 3269 init1: 3269 opt: 3269 Z-score: 3039.2 bits: 572.1 E(): 1.2e-160 Smith-Waterman score: 3269; 98.406% identity (99.801% similar) in 502 aa overlap (4-505:67-568) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...:::: :::::::::::::::::::: gi|739 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQW 40 50 60 70 80 90 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 100 110 120 130 140 150 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 TSAAVVSQSPQLYNQTSNPPSSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 160 170 180 190 200 210 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAK 220 230 240 250 260 270 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 280 290 300 310 320 330 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 340 350 360 370 380 390 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|739 WKKMACLLCRRQFPNRDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 400 410 420 430 440 450 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 460 470 480 490 500 510 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 520 530 540 550 560 >>gi|1244404|gb|AAA99715.1| putative tumor suppressor (815 aa) initn: 3271 init1: 3271 opt: 3271 Z-score: 3038.9 bits: 572.5 E(): 1.3e-160 Smith-Waterman score: 3271; 98.805% identity (99.602% similar) in 502 aa overlap (4-505:314-815) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...::::::::::::::::::::::::: gi|124 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SSTQSQSGEGVSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|124 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFIEME 770 780 790 800 810 >>gi|73985439|ref|XP_850319.1| PREDICTED: similar to RNA (643 aa) initn: 3269 init1: 3269 opt: 3269 Z-score: 3038.4 bits: 572.1 E(): 1.3e-160 Smith-Waterman score: 3269; 98.406% identity (99.801% similar) in 502 aa overlap (4-505:142-643) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...:::: :::::::::::::::::::: gi|739 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQW 120 130 140 150 160 170 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 180 190 200 210 220 230 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 TSAAVVSQSPQLYNQTSNPPSSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 240 250 260 270 280 290 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAK 300 310 320 330 340 350 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 360 370 380 390 400 410 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 420 430 440 450 460 470 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|739 WKKMACLLCRRQFPNRDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 480 490 500 510 520 530 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 540 550 560 570 580 590 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 600 610 620 630 640 >>gi|1613900|gb|AAB42216.1| partial CDS, human putative (698 aa) initn: 2394 init1: 2394 opt: 3264 Z-score: 3033.3 bits: 571.3 E(): 2.6e-160 Smith-Waterman score: 3264; 98.805% identity (99.801% similar) in 502 aa overlap (4-505:198-698) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...::::::::::::::::::::::::: gi|161 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQW 170 180 190 200 210 220 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 230 240 250 260 270 280 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|161 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKY-VPDTSTYQ 290 300 310 320 330 340 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK 350 360 370 380 390 400 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 410 420 430 440 450 460 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 470 480 490 500 510 520 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 530 540 550 560 570 580 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 590 600 610 620 630 640 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME ::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|161 RKCQGITAPIEAQVRLKGAGLGAKASAYGLSGADSYKDAVRKAMFARFTEME 650 660 670 680 690 >>gi|116255985|sp|Q1RMU5|RBM5_BOVIN RNA-binding protein (815 aa) initn: 3246 init1: 3246 opt: 3246 Z-score: 3015.7 bits: 568.2 E(): 2.5e-159 Smith-Waterman score: 3246; 97.809% identity (99.602% similar) in 502 aa overlap (4-505:314-815) 10 20 30 fh1945 NGFRSGERDLVLSDGNRVSAFSVASTAIAAAQW .:...:::: :::::::::::::::::::: gi|116 AMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQW 290 300 310 320 330 340 40 50 60 70 80 90 fh1945 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTT 350 360 370 380 390 400 100 110 120 130 140 150 fh1945 TSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|116 TSAAVVSQSPQLYNQTSNPPSSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQ 410 420 430 440 450 460 160 170 180 190 200 210 fh1945 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAK ::::::::::::::::::::::::::::::::::::::::::. ::::.::::.:::::: gi|116 YDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYMLAAESNSHQQTGLPPAK 470 480 490 500 510 520 220 230 240 250 260 270 fh1945 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGF 530 540 550 560 570 580 280 290 300 310 320 330 fh1945 ALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|116 ALFEKKGALAERQQLIPELVRNGDEDNPLKRGLVAAYSGDSDNEEELVERLESEEEKLAD 590 600 610 620 630 640 340 350 360 370 380 390 fh1945 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 WKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRD 650 660 670 680 690 700 400 410 420 430 440 450 fh1945 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLG 710 720 730 740 750 760 460 470 480 490 500 fh1945 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 770 780 790 800 810 505 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 22:58:23 2008 done: Sat Aug 9 23:00:46 2008 Total Scan time: 888.620 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]