hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-23004778/chunk_1/iprscan-20080809-23004778.nocrc
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Query sequence: fh19454
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01585.13.fs G-patch domain                                  80.7    1.3e-22   1
PF01585.13.ls G-patch domain                                  82.7    1.1e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01585.13.fs   1/1     433   477 ..     1    45 []    80.7  1.3e-22
PF01585.13.ls   1/1     433   477 ..     1    45 []    82.7  1.1e-21

Alignments of top-scoring domains:
PF01585.13.fs: domain 1 of 1, from 433 to 477: score 80.7, E = 1.3e-22
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdrkGLGae<-
                      +sniG k+Lq+MGW+eG+GLG++ qGi+ Piea+++ +++GLGa+  
     fh19454   433    HSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK   477  

                   *
                    
     fh19454     -   -    

PF01585.13.ls: domain 1 of 1, from 433 to 477: score 82.7, E = 1.1e-21
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdrkGLGae<-
                      +sniG k+Lq+MGW+eG+GLG++ qGi+ Piea+++ +++GLGa+  
     fh19454   433    HSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK   477  

                   *
                    
     fh19454     -   -    

//