# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh19623.fasta.nr -Q fh19623.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh19623, 233 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822533 sequences Expectation_n fit: rho(ln(x))= 4.7507+/-0.000184; mu= 9.9911+/- 0.010 mean_var=71.9009+/-13.723, 0's: 42 Z-trim: 53 B-trim: 0 in 0/66 Lambda= 0.151254 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088346|dbj|BAD92620.1| mouse double minute 4 ( 233) 1610 360.1 1.5e-97 gi|85397573|gb|AAI05107.1| MDM4 protein [Homo sapi ( 440) 1503 337.0 2.6e-90 gi|114572073|ref|XP_001160110.1| PREDICTED: mouse ( 440) 1498 335.9 5.5e-90 gi|76803799|sp|O15151.2|MDM4_HUMAN Mdm4 protein (p ( 490) 1497 335.7 6.9e-90 gi|2253391|gb|AAB62928.1| MDM2-like p53-binding pr ( 490) 1497 335.7 6.9e-90 gi|114572075|ref|XP_001159838.1| PREDICTED: mouse ( 434) 1492 334.6 1.3e-89 gi|114572063|ref|XP_514127.2| PREDICTED: mouse dou ( 490) 1492 334.6 1.5e-89 gi|109018717|ref|XP_001097488.1| PREDICTED: mouse ( 435) 1486 333.2 3.3e-89 gi|109018715|ref|XP_001097583.1| PREDICTED: mouse ( 479) 1480 332.0 8.8e-89 gi|149707797|ref|XP_001489085.1| PREDICTED: simila ( 491) 1431 321.3 1.5e-85 gi|74005884|ref|XP_536098.2| PREDICTED: similar to ( 519) 1403 315.2 1.1e-83 gi|122135681|sp|Q2HJ21.1|MDM4_BOVIN Mdm4 protein ( ( 491) 1400 314.5 1.6e-83 gi|81910375|sp|Q5XIN1.1|MDM4_RAT Mdm4 protein (p53 ( 490) 1288 290.1 3.7e-76 gi|8472493|sp|O35618.1|MDM4_MOUSE Mdm4 protein (p5 ( 489) 1285 289.4 5.8e-76 gi|13277696|gb|AAH03750.1| Mdm4 protein [Mus muscu ( 490) 1285 289.4 5.8e-76 gi|12857104|dbj|BAB30893.1| unnamed protein produc ( 489) 1280 288.3 1.2e-75 gi|74137727|dbj|BAE24051.1| unnamed protein produc ( 490) 1280 288.3 1.2e-75 gi|148688490|gb|EDL20437.1| mCG1033159 [Mus muscul ( 406) 1171 264.5 1.6e-68 gi|126306849|ref|XP_001371175.1| PREDICTED: simila ( 488) 1164 263.0 5.1e-68 gi|149411582|ref|XP_001507004.1| PREDICTED: hypoth ( 516) 1087 246.3 6.1e-63 gi|62944411|gb|AAY22054.1| double minute 4 variant ( 164) 950 215.9 2.7e-54 gi|118102383|ref|XP_417957.2| PREDICTED: hypotheti ( 481) 883 201.7 1.5e-49 gi|149058624|gb|EDM09781.1| rCG46484, isoform CRA_ ( 304) 852 194.8 1.1e-47 gi|149058623|gb|EDM09780.1| rCG46484, isoform CRA_ ( 420) 852 194.9 1.4e-47 gi|55960021|emb|CAI14097.1| Mdm4 p53 binding prote ( 171) 839 191.7 5.4e-47 gi|47227269|emb|CAF96818.1| unnamed protein produc ( 529) 653 151.6 2e-34 gi|187609707|sp|Q7ZUW7.2|MDM4_DANRE Mdm4 protein ( ( 496) 620 144.3 2.8e-32 gi|28839755|gb|AAH47801.1| Transformed 3T3 cell do ( 491) 615 143.2 6e-32 gi|89269813|emb|CAJ81572.1| Mdm2, transformed 3T3 ( 467) 527 124.0 3.5e-26 gi|39645866|gb|AAH63898.1| Mdm2 p53 binding protei ( 482) 527 124.0 3.5e-26 gi|8488990|sp|P56273|MDM2_XENLA E3 ubiquitin-prote ( 473) 505 119.2 9.7e-25 gi|126339148|ref|XP_001373571.1| PREDICTED: simila ( 572) 505 119.3 1.1e-24 gi|49257576|gb|AAH74153.1| MGC81897 protein [Xenop ( 473) 503 118.8 1.3e-24 gi|149632285|ref|XP_001511571.1| PREDICTED: simila ( 475) 500 118.1 2.1e-24 gi|7230490|gb|AAF42995.1|AF201370_1 MDM2-a1 [Homo ( 265) 494 116.6 3.4e-24 gi|55725400|emb|CAH89564.1| hypothetical protein [ ( 497) 495 117.1 4.6e-24 gi|114645770|ref|XP_001154831.1| PREDICTED: hypoth ( 327) 493 116.4 4.6e-24 gi|114645766|ref|XP_001155106.1| PREDICTED: hypoth ( 442) 493 116.6 5.7e-24 gi|114645764|ref|XP_001154940.1| PREDICTED: hypoth ( 452) 493 116.6 5.8e-24 gi|114645778|ref|XP_001155154.1| PREDICTED: hypoth ( 491) 493 116.6 6.1e-24 gi|114645762|ref|XP_001155208.1| PREDICTED: hypoth ( 497) 493 116.6 6.2e-24 gi|109097735|ref|XP_001117266.1| PREDICTED: Mdm2, ( 296) 490 115.8 6.7e-24 gi|10045127|emb|CAC07809.1| p53-binding protein [H ( 243) 489 115.5 6.8e-24 gi|109097731|ref|XP_001117311.1| PREDICTED: Mdm2, ( 321) 490 115.8 7.1e-24 gi|109097729|ref|XP_001117330.1| PREDICTED: mouse ( 436) 490 115.9 8.9e-24 gi|109097727|ref|XP_001117286.1| PREDICTED: mouse ( 446) 490 115.9 9e-24 gi|8472521|sp|P56951|MDM2_HORSE E3 ubiquitin-prote ( 491) 490 116.0 9.7e-24 gi|109097725|ref|XP_001117336.1| PREDICTED: mouse ( 491) 490 116.0 9.7e-24 gi|148745253|gb|AAI42265.1| MDM2 protein [Bos taur ( 492) 490 116.0 9.7e-24 gi|992677|gb|AAA75514.1| mdm2-A ( 296) 487 115.1 1.1e-23 >>gi|62088346|dbj|BAD92620.1| mouse double minute 4 homo (233 aa) initn: 1610 init1: 1610 opt: 1610 Z-score: 1906.4 bits: 360.1 E(): 1.5e-97 Smith-Waterman score: 1610; 100.000% identity (100.000% similar) in 233 aa overlap (1-233:1-233) 10 20 30 40 50 60 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDEWQCTECKKFNSPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDEWQCTECKKFNSPSK 10 20 30 40 50 60 70 80 90 100 110 120 fh1962 RYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCRRTISAPVVRPKDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCRRTISAPVVRPKDAY 70 80 90 100 110 120 130 140 150 160 170 180 fh1962 IKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTDTENMEDCQNLLKPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTDTENMEDCQNLLKPC 130 140 150 160 170 180 190 200 210 220 230 fh1962 SLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA 190 200 210 220 230 >>gi|85397573|gb|AAI05107.1| MDM4 protein [Homo sapiens] (440 aa) initn: 1503 init1: 1503 opt: 1503 Z-score: 1776.6 bits: 337.0 E(): 2.6e-90 Smith-Waterman score: 1503; 99.541% identity (100.000% similar) in 218 aa overlap (16-233:223-440) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSED .::::::::::::::::::::::::::::: gi|853 WDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQVIEVGKNDDLEDSKSLSDDTDVEVTSED 200 210 220 230 240 250 50 60 70 80 90 100 fh1962 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|853 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC 260 270 280 290 300 310 110 120 130 140 150 160 fh1962 RRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|853 RRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT 320 330 340 350 360 370 170 180 190 200 210 220 fh1962 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|853 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 380 390 400 410 420 430 230 fh1962 LVIKVFIA :::::::: gi|853 LVIKVFIA 440 >>gi|114572073|ref|XP_001160110.1| PREDICTED: mouse doub (440 aa) initn: 1498 init1: 1498 opt: 1498 Z-score: 1770.7 bits: 335.9 E(): 5.5e-90 Smith-Waterman score: 1498; 99.083% identity (100.000% similar) in 218 aa overlap (16-233:223-440) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSED .::::::::::::::::::::::::::::: gi|114 WDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQVIEVGKNDDLEDSKSLSDDTDVEVTSED 200 210 220 230 240 250 50 60 70 80 90 100 fh1962 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC 260 270 280 290 300 310 110 120 130 140 150 160 fh1962 RRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|114 RRTISAPVVRPKDVYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT 320 330 340 350 360 370 170 180 190 200 210 220 fh1962 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 380 390 400 410 420 430 230 fh1962 LVIKVFIA :::::::: gi|114 LVIKVFIA 440 >>gi|76803799|sp|O15151.2|MDM4_HUMAN Mdm4 protein (p53-b (490 aa) initn: 1497 init1: 1497 opt: 1497 Z-score: 1769.0 bits: 335.7 E(): 6.9e-90 Smith-Waterman score: 1497; 99.539% identity (100.000% similar) in 217 aa overlap (17-233:274-490) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .::::::::::::::::::::::::::::: gi|768 SVSEQLGVGIKVEAADTEQTSEEVGKVSDKKVIEVGKNDDLEDSKSLSDDTDVEVTSEDE 250 260 270 280 290 300 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR 310 320 330 340 350 360 110 120 130 140 150 160 fh1962 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD 370 380 390 400 410 420 170 180 190 200 210 220 fh1962 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 430 440 450 460 470 480 230 fh1962 VIKVFIA ::::::: gi|768 VIKVFIA 490 >>gi|2253391|gb|AAB62928.1| MDM2-like p53-binding protei (490 aa) initn: 1497 init1: 1497 opt: 1497 Z-score: 1769.0 bits: 335.7 E(): 6.9e-90 Smith-Waterman score: 1497; 99.539% identity (100.000% similar) in 217 aa overlap (17-233:274-490) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .::::::::::::::::::::::::::::: gi|225 SVSEQLGVGIKVEAADTEQTSEEVGKVSDKKVIEVGKNDDLEDSKSLSDDTDVEVTSEDE 250 260 270 280 290 300 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|225 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR 310 320 330 340 350 360 110 120 130 140 150 160 fh1962 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|225 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD 370 380 390 400 410 420 170 180 190 200 210 220 fh1962 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|225 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 430 440 450 460 470 480 230 fh1962 VIKVFIA ::::::: gi|225 VIKVFIA 490 >>gi|114572075|ref|XP_001159838.1| PREDICTED: mouse doub (434 aa) initn: 1492 init1: 1492 opt: 1492 Z-score: 1763.7 bits: 334.6 E(): 1.3e-89 Smith-Waterman score: 1492; 99.078% identity (100.000% similar) in 217 aa overlap (17-233:218-434) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .::::::::::::::::::::::::::::: gi|114 SVSEQLGVGIKVEAADTEQTSEEVGKVSDKKVIEVGKNDDLEDSKSLSDDTDVEVTSEDE 190 200 210 220 230 240 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR 250 260 270 280 290 300 110 120 130 140 150 160 fh1962 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RTISAPVVRPKDVYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD 310 320 330 340 350 360 170 180 190 200 210 220 fh1962 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 370 380 390 400 410 420 230 fh1962 VIKVFIA ::::::: gi|114 VIKVFIA 430 >>gi|114572063|ref|XP_514127.2| PREDICTED: mouse double (490 aa) initn: 1492 init1: 1492 opt: 1492 Z-score: 1763.1 bits: 334.6 E(): 1.5e-89 Smith-Waterman score: 1492; 99.078% identity (100.000% similar) in 217 aa overlap (17-233:274-490) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .::::::::::::::::::::::::::::: gi|114 SVSEQLGVGIKVEAADTEQTSEEVGKVSDKKVIEVGKNDDLEDSKSLSDDTDVEVTSEDE 250 260 270 280 290 300 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR 310 320 330 340 350 360 110 120 130 140 150 160 fh1962 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RTISAPVVRPKDVYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD 370 380 390 400 410 420 170 180 190 200 210 220 fh1962 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 430 440 450 460 470 480 230 fh1962 VIKVFIA ::::::: gi|114 VIKVFIA 490 >>gi|109018717|ref|XP_001097488.1| PREDICTED: mouse doub (435 aa) initn: 1486 init1: 1486 opt: 1486 Z-score: 1756.7 bits: 333.2 E(): 3.3e-89 Smith-Waterman score: 1486; 98.165% identity (99.541% similar) in 218 aa overlap (16-233:218-435) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSED .::::.:::::::::::::::::::::::: gi|109 WDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQVIEMGKNDDLEDSKSLSDDTDVEVTSED 190 200 210 220 230 240 50 60 70 80 90 100 fh1962 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDC 250 260 270 280 290 300 110 120 130 140 150 160 fh1962 RRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT :::::::::::::.::::::::::::::::::::::::::::::::: :::::::::::: gi|109 RRTISAPVVRPKDVYIKKENSKLFDPCNSVEFLDLAHSSESQETISSTGEQLDNLSEQRT 310 320 330 340 350 360 170 180 190 200 210 220 fh1962 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 370 380 390 400 410 420 230 fh1962 LVIKVFIA :::::::: gi|109 LVIKVFIA 430 >>gi|109018715|ref|XP_001097583.1| PREDICTED: mouse doub (479 aa) initn: 1480 init1: 1480 opt: 1480 Z-score: 1749.0 bits: 332.0 E(): 8.8e-89 Smith-Waterman score: 1480; 98.157% identity (99.539% similar) in 217 aa overlap (17-233:263-479) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .:::.::::::::::::::::::::::::: gi|109 SVSEQLGVGIKVEAGDTEQTSEEVGKVSDKKVIEMGKNDDLEDSKSLSDDTDVEVTSEDE 240 250 260 270 280 290 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCR 300 310 320 330 340 350 110 120 130 140 150 160 fh1962 RTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTD ::::::::::::.::::::::::::::::::::::::::::::::: ::::::::::::: gi|109 RTISAPVVRPKDVYIKKENSKLFDPCNSVEFLDLAHSSESQETISSTGEQLDNLSEQRTD 360 370 380 390 400 410 170 180 190 200 210 220 fh1962 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 420 430 440 450 460 470 230 fh1962 VIKVFIA ::::::: gi|109 VIKVFIA >>gi|149707797|ref|XP_001489085.1| PREDICTED: similar to (491 aa) initn: 913 init1: 913 opt: 1431 Z-score: 1691.1 bits: 321.3 E(): 1.5e-85 Smith-Waterman score: 1431; 95.872% identity (97.248% similar) in 218 aa overlap (17-233:274-491) 10 20 30 40 fh1962 PHLKQVNITNEMFLPSQVIEVGKNDDLEDSKSLSDDTDVEVTSEDE .:::::::::::::::::: :::::::::: gi|149 SVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSLSDVTDVEVTSEDE 250 260 270 280 290 300 50 60 70 80 90 100 fh1962 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEK-ENEGNDVPDC ::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::::: gi|149 WQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKKENEGIDVPDC 310 320 330 340 350 360 110 120 130 140 150 160 fh1962 RRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRT :::::::::::::.:::.:: :::::::::::::::::::::::::::::: ::: :::: gi|149 RRTISAPVVRPKDVYIKEENPKLFDPCNSVEFLDLAHSSESQETISSMGEQSDNLFEQRT 370 380 390 400 410 420 170 180 190 200 210 220 fh1962 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 430 440 450 460 470 480 230 fh1962 LVIKVFIA :::::::: gi|149 LVIKVFIA 490 233 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 23:17:01 2008 done: Sat Aug 9 23:19:49 2008 Total Scan time: 665.180 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]