hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-23402789/chunk_1/iprscan-20080809-23402789.nocrc
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Query sequence: fh19857
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF01251.8.fs  Ribosomal protein S7e                     121.7    9.5e-34   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF01251.8.fs    1/1      10    61 ..   117   168 ..   121.7  9.5e-34

Alignments of top-scoring domains:
PF01251.8.fs: domain 1 of 1, from 10 to 61: score 121.7, E = 9.5e-34
                   *->SRtLTaVhdaILEDLVFPtEIVGKRiRvklDGskliKVhLDkkdqnt
                      SRtLTaVhdaILEDLVFP+EIVGKRiRvklDGs+liKVhLDk++qn+
     fh19857    10    SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNN 56   

                   ieyKv<-*
                   +e+Kv   
     fh19857    57 VEHKV    61   

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