hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-00001987/chunk_1/iprscan-20080810-00001987.nocrc
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Query sequence: fh20327
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
SM00038                                                 440.3   9.8e-128   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
SM00038        1/1     787  1016 ..     1   240 []   440.3 9.8e-128

Alignments of top-scoring domains:
SM00038: domain 1 of 1, from 787 to 1016: score 440.3, E = 9.8e-128
                   *->deeifasLkslnnLHKqIEqlksPtGskdnPARtCkDLkLcHpelkd
                      +eeif+sL+sl++    IE++k P G++ nPARtCkDL+L+Hp+++d
     fh20327   787    MEEIFGSLNSLKQ---DIEHMKFPMGTQTNPARTCKDLQLSHPDFPD 830  

                   GeYWvDPNqGCirDAikVfCnfetGvgeTCvspspssiprktWysgkskd
                   GeYW+DPNqGC++D++kV+Cnf+ G geTC++p+++s++ ++ +++k+  
     fh20327   831 GEYWIDPNQGCSGDSFKVYCNFTSG-GETCIYPDKKSEGVRISSWPKE-- 877  

                   kkhvWFgetmngGfkFsYgdsegspvgvvQLTFLRLLSteAsQniTYhCK
                   k+++WF+e+++ G+++sY d eg+    vQ+TFL LL ++A+Qn+TYhC 
     fh20327   878 KPGSWFSEFKR-GKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCH 926  

                   NSvAYmDeatGNlkkAlilrgsnDvElsaegnskftYeVLeDGCqkrtgk
                   +S+A++D  +G+++kAl++ gsnD+E+s++  +++ ++ L DGC++r+g+
     fh20327   927 QSAAWYDVSSGSYDKALRFLGSNDEEMSYD--NNPFIKTLYDGCASRKGY 974  

                   wgKTViEyrTkkteRLPIvDiAPsDIGGadQeFGveiGPVCFs<-*
                     KTViE+ T+k  ++PIvD++ +D+G ++Q+FG+e+GPVCF+   
     fh20327   975 E-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFL    1016 

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