hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-00315611/chunk_1/iprscan-20080810-00315611.nocrc
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Query sequence: fh20918
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00337.12.ls   Galactoside-binding lectin              200.1    4.9e-57   1
PF00337.12.fs   Galactoside-binding lectin              198.2    1.8e-56   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00337.12.fs     1/1     125   255 ..     1   142 []   198.2  1.8e-56
PF00337.12.ls     1/1     125   255 ..     1   142 []   200.1  4.9e-57

Alignments of top-scoring domains:
PF00337.12.fs: domain 1 of 1, from 125 to 255: score 198.2, E = 1.8e-56
                   *->pflgvlpggltpGssltisGivldapnakrFsiNLqtgevgpnddia
                      p+ ++lpgg+ p + +ti G+v+  pna+r+++++q g     +d+a
     fh20918   125    PYNLPLPGGVVPRMLITILGTVK--PNANRIALDFQRG-----NDVA 164  

                   LHfNpRFdehggknviVrNSrqnGkWGpEERCssseg.fPFqpGqpFelt
                   +HfNpRF+e + ++viV+N++ +++WG+EER     + fPF  G+pF+++
     fh20918   165 FHFNPRFNE-NNRRVIVCNTKLDNNWGREER----QSvFPFESGKPFKIQ 209  

                   IlvgedkfqiyVNgkhfteFphRlppLedidylevnGDvkltsvhi<-*
                   +lv++d+f+++VN++h+++++hR++ L  i+ l ++GD++lts ++   
     fh20918   210 VLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASY    255  

PF00337.12.ls: domain 1 of 1, from 125 to 255: score 200.1, E = 4.9e-57
                   *->pflgvlpggltpGssltisGivldapnakrFsiNLqtgevgpnddia
                      p+ ++lpgg+ p + +ti G+v+  pna+r+++++q g     +d+a
     fh20918   125    PYNLPLPGGVVPRMLITILGTVK--PNANRIALDFQRG-----NDVA 164  

                   LHfNpRFdehggknviVrNSrqnGkWGpEERCssseg.fPFqpGqpFelt
                   +HfNpRF+e + ++viV+N++ +++WG+EER     + fPF  G+pF+++
     fh20918   165 FHFNPRFNE-NNRRVIVCNTKLDNNWGREER----QSvFPFESGKPFKIQ 209  

                   IlvgedkfqiyVNgkhfteFphRlppLedidylevnGDvkltsvhi<-*
                   +lv++d+f+++VN++h+++++hR++ L  i+ l ++GD++lts ++   
     fh20918   210 VLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASY    255  

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