hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090428/iprscan-20090428-18115770/chunk_1/iprscan-20090428-18115770.nocrc
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Query sequence: fh21703
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00320.17.fs GATA zinc finger                                35.4    1.3e-09   1
PF00320.17.ls GATA zinc finger                                37.4    4.6e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00320.17.fs   1/1     433   467 ..     1    36 []    35.4  1.3e-09
PF00320.17.ls   1/1     433   467 ..     1    36 []    37.4  4.6e-08

Alignments of top-scoring domains:
PF00320.17.fs: domain 1 of 1, from 433 to 467: score 35.4, E = 1.3e-09
                   *->CsnCgttkTplWRrgpdGnrtLCNACGLyykkhgvk<-*
                      C++C+t+ Tp+W    +G++ LC  C+    k+ +k   
     fh21703   433    CAQCRTDFTPHWKQEKNGKI-LCEQCMTSNQKKALK    467  

PF00320.17.ls: domain 1 of 1, from 433 to 467: score 37.4, E = 4.6e-08
                   *->CsnCgttkTplWRrgpdGnrtLCNACGLyykkhgvk<-*
                      C++C+t+ Tp+W    +G++ LC  C+    k+ +k   
     fh21703   433    CAQCRTDFTPHWKQEKNGKI-LCEQCMTSNQKKALK    467  

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