hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-01104408/chunk_1/iprscan-20080810-01104408.nocrc
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Query sequence: fh21874
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00069.15.fs Protein kinase domain                           95.4    5.6e-27   1
PF00069.15.ls Protein kinase domain                           79.7    8.3e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      37   243 ..     1   214 [.    95.4  5.6e-27
PF00069.15.ls   1/1      37   295 ..     1   287 []    79.7  8.3e-21

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 37 to 243: score 95.4, E = 5.6e-27
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +++l+k+G G+fG+ y a +  t++ VA+K+ + +  k   ++    
     fh21874    37    WKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKM---- 79   

                   lsEiqilkrL.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls
                     E+++lk+L++ ++++r+i++ ++++  y+V+ + +    ++dL     
     fh21874    80 --EVAVLKKLqGKDHVCRFIGCGRNDRFNYVVMQLQGRN--LADLR---- 121  

                   etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng
                   +++++g++  +  +  +  +Qil+ +e +Hs g++HRD+KP+N+ + + +
     fh21874   122 RSQSRGTF--TISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFP 169  

                   vvdaflKiaDFGlAkkls.....t.sss.lttfvGTpwYmAPEvllggng
                    ++ +    DFGlA+++ ++ ++ ++ +   +f GT +Y++   ++ +++
     fh21874   170 STCRKCYMLDFGLARQFTnscgdVrPPRaVAGFRGTVRYASINAHR-NRE 218  

                   ygtkvDvWSlGvilyelltGkpPFs<-*
                    g+  D WSl  +l e++ G++P++   
     fh21874   219 MGRHDDLWSLFYMLVEFVVGQLPWR    243  

PF00069.15.ls: domain 1 of 1, from 37 to 295: score 79.7, E = 8.3e-21
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +++l+k+G G+fG+ y a +  t++ VA+K+ + +  k   ++    
     fh21874    37    WKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKM---- 79   

                   lsEiqilkrL.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls
                     E+++lk+L++ ++++r+i++ ++++  y+V+ + +    ++dL     
     fh21874    80 --EVAVLKKLqGKDHVCRFIGCGRNDRFNYVVMQLQGRN--LADLR---- 121  

                   etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng
                   +++++g++  +  +  +  +Qil+ +e +Hs g++HRD+KP+N+ + + +
     fh21874   122 RSQSRGTF--TISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFP 169  

                   vvdaflKiaDFGlAkkls.....t.sss.lttfvGTpwYmAPEvllggng
                    ++ +    DFGlA+++ ++ ++ ++ +   +f GT +Y++   ++ +++
     fh21874   170 STCRKCYMLDFGLARQFTnscgdVrPPRaVAGFRGTVRYASINAHR-NRE 218  

                   ygtkvDvWSlGvilyelltGkpPFsgev.q.ds.ldqlqlirkilgpple
                    g+  D WSl  +l e++ G++P++ ++++++   + +++++ +l+ +  
     fh21874   219 MGRHDDLWSLFYMLVEFVVGQLPWR-KIkDkEQvGSIKERYDHRLMLK-- 265  

                   fdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPw
                                      l++e+  +++ +  +D    +   ++l +  
     fh21874   266 ------------------HLPPEFSIFLDHISSLDYFTKPD-YQLLTS-- 294  

                   f<-*
                   +   
     fh21874   295 V    295  

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