hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-01232204/chunk_1/iprscan-20080810-01232204.nocrc
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Query sequence: fh21945
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04212.8.fs MIT (microtubule interacting and transport)     42.1    2.9e-11   1
PF04212.8.ls MIT (microtubule interacting and transport)     44.1    4.4e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04212.8.fs   1/1     115   143 ..     1    29 []    42.1  2.9e-11
PF04212.8.ls   1/1     115   143 ..     1    29 []    44.1  4.4e-10

Alignments of top-scoring domains:
PF04212.8.fs: domain 1 of 1, from 115 to 143: score 42.1, E = 2.9e-11
                   *->lkyekddkrReaikaKiaeYldRAEeLKe<-*
                      ++ +++ +rRea+k Ki++Yl+RAEe+ +   
     fh21945   115    IHVDPNKERREAVKLKITKYLRRAEEIFN    143  

PF04212.8.ls: domain 1 of 1, from 115 to 143: score 44.1, E = 4.4e-10
                   *->lkyekddkrReaikaKiaeYldRAEeLKe<-*
                      ++ +++ +rRea+k Ki++Yl+RAEe+ +   
     fh21945   115    IHVDPNKERREAVKLKITKYLRRAEEIFN    143  

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