hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-01291917/chunk_1/iprscan-20080810-01291917.nocrc
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Query sequence: fh21969
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 170.3    1.9e-46   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/9     334   383 ..     1    46 []    18.9     0.49
SM00320    2/9     434   473 ..     1    46 []    11.7      6.9
SM00320    3/9     482   519 ..     1    46 []     6.2       52
SM00320    4/9     534   573 ..     1    46 []    24.6    0.014
SM00320    5/9     617   656 ..     1    46 []    29.6  0.00043
SM00320    6/9     659   697 ..     1    46 []     3.5  1.4e+02
SM00320    7/9     700   739 ..     1    46 []    14.4      2.6
SM00320    8/9     746   785 ..     1    46 []    33.5  2.9e-05
SM00320    9/9     859   899 ..     1    46 []    27.9   0.0014

Alignments of top-scoring domains:
SM00320: domain 1 of 9, from 334 to 383: score 18.9, E = 0.49
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.Dgt....
                      + +  r + gHt+   V ++a++pd        ++a+g   g ++++
     fh21969   334    EeRTQRHYLGHTD--CVKCLAIHPDK------IRIATGQiAGVdkdg 372  

                   ......irlWd<-*
                   ++ ++++r+Wd   
     fh21969   373 rplqphVRVWD    383  

SM00320: domain 2 of 9, from 434 to 473: score 11.7, E = 6.9
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +   +++k  +    V++v f+p++      n ++++++ + i +W
     fh21969   434    RkAKGAEIKTTNE--VVLAVEFHPTD-----ANTIITCGkSH-IFFW 472  

                   d<-*
                       
     fh21969   473 T    473  

SM00320: domain 3 of 9, from 482 to 519: score 6.2, E = 52
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++    +++   +   V ++af  +g      ++l +g++ g   +W
     fh21969   482    KqGIFGKYE-KPK--FVQCLAFLGNG------DVL-TGDsGGVMLIW 518  

                   d<-*
                   +   
     fh21969   519 S    519  

SM00320: domain 4 of 9, from 534 to 573: score 24.6, E = 0.014
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                        +  + +k+H+g  +V +++   +g       ll  g++D++i lW
     fh21969   534    VyQISKQIKAHDG--SVFTLCQMRNG------MLLTGGGkDRKIILW 572  

                   d<-*
                   d   
     fh21969   573 D    573  

SM00320: domain 5 of 9, from 617 to 656: score 29.6, E = 0.00043
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++    + +gHt+  + +++a +p        +ll+++ +D++++lW
     fh21969   617    NdGFQIEVQGHTD--ELWGLATHPFK------DLLLTCAqDRQVCLW 655  

                   d<-*
                   +   
     fh21969   656 N    656  

SM00320: domain 6 of 9, from 659 to 697: score 3.5, E = 1.4e+02
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      +++l  t    +   p ++ +f+p+g      +++a g + g   + 
     fh21969   659    EhRLEWTRL-VDE--PGHCADFHPSG------TVVAIGThSGRWFVL 696  

                   d<-*
                   d   
     fh21969   697 D    697  

SM00320: domain 7 of 9, from 700 to 739: score 14.4, E = 2.6
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+ l+++ +  +     + +++s dg      ++la+gs+D+ i+l+
     fh21969   700    TrDLVSIHTDGNE--QLSVMRYSIDG------TFLAVGShDNFIYLY 738  

                   d<-*
                       
     fh21969   739 V    739  

SM00320: domain 8 of 9, from 746 to 785: score 33.5, E = 2.9e-05
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      + +    ++gH++  ++t++++spd+      +++ s s+D  i  W
     fh21969   746    KySRYGRCTGHSS--YITHLDWSPDN------KYIMSNSgDYEILYW 784  

                   d<-*
                   d   
     fh21969   785 D    785  

SM00320: domain 9 of 9, from 859 to 899: score 27.9, E = 0.0014
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       + + +++++H++   Vt v+f +++     ++l+ +g++D +i  W
     fh21969   859    AkAPSHKYSAHSS--HVTNVSFTHND-----SHLISTGGkDMSIIQW 898  

                   d<-*
                   +   
     fh21969   899 K    899  

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