hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-01475700/chunk_1/iprscan-20080810-01475700.nocrc
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Query sequence: fh22128
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00462                                                  53.3    3.2e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00462    1/1       1    98 [.     1   156 []    53.3  3.2e-11

Alignments of top-scoring domains:
SM00462: domain 1 of 1, from 1 to 98: score 53.3, E = 3.2e-11
                   *->segvsfeVkYLGsvevpearkSlapgkglqvlqeairklrsekkkpq
                                         +                     ++kk +
     fh22128     1    -------------------K---------------------TGKKAV 7    

                   kvilsvSsdgvklidektkqvlaehplrrIsfcaadpqrwntGgdgstdd
                   k +l+vS dg++++dektk++++++ ++++sfca+d+             
     fh22128     8 KAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDR-----------NF 46   

                   drvFgyiardpgssgSnrgtsrfaCHVFrcekaaaedialaigqaFqvay
                   dr F+yi+rd++++       r++CH+F+  k+  e++++a+g+aF+ + 
     fh22128    47 DRAFSYICRDGTTR-------RWICHCFMAVKDTGERLSHAVGCAFAACL 89   

                   elklkarse<-*
                   e+k+k+ +e   
     fh22128    90 ERKQKREKE    98   

//