hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02003744/chunk_1/iprscan-20080810-02003744.nocrc
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Query sequence: fh22627
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00054                                                  41.1    1.5e-07   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00054    1/2     628   656 ..     1    29 []     9.5       11
SM00054    2/2     664   692 ..     1    29 []    31.6  0.00011

Alignments of top-scoring domains:
SM00054: domain 1 of 2, from 628 to 656: score 9.5, E = 11
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                        k+ F +fD+D  G+I+  + +++l s+   
     fh22627   628    RYKKRFHKFDADQKGFITIVDVQRVLESI    656  

SM00054: domain 2 of 2, from 664 to 692: score 31.6, E = 0.00011
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       l e+ +e+D +++G+++++Ef++l++++   
     fh22627   664    TLHEILNEVDLNKNGQVELNEFLQLMSAI    692  

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