hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-09012724/chunk_1/iprscan-20090618-09012724.nocrc
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Query sequence: fh22735
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                 150.4    1.8e-40   2
SM00462                                                 143.6      2e-38   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00454    1/2      32   101 ..     1    67 []    79.5    4e-19
SM00454    2/2     106   174 ..     1    67 []    70.9  1.6e-16
SM00462    1/1     222   360 ..     1   156 []   143.6    2e-38

Alignments of top-scoring domains:
SM00454: domain 1 of 2, from 32 to 101: score 79.5, E = 4e-19
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeellllt..seedLk
                       +++++ +V++WLesigl+qY++++++ng+d  ++   +  +++dL+
     fh22735    32    GPrCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNvmEDQDLL 78   

                   elGitllGhRkkIlsaiqklkeq<-*
                   e+Gi + GhR++Il+aiq l +    
     fh22735    79 EIGILNSGHRQRILQAIQLLPKM    101  

SM00454: domain 2 of 2, from 106 to 174: score 70.9, E = 1.6e-16
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeellllt.seedLke
                       ++ +p sVaeWL+si l++Y+++F+ ng+++++ll+ + + e+++ 
     fh22735   106    HDgYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIwEVELINV 152  

                   lGitllGhRkkIlsaiqklkeq<-*
                   l+i+l+GhRk+Il ++ + +++   
     fh22735   153 LKINLIGHRKRILASLGDRLHD    174  

SM00462: domain 1 of 1, from 222 to 360: score 143.6, E = 2e-38
                   *->segvsfeVkYLGsvevpearkSlapgkglqvlqeairklr.......
                      ++ + +++ YLGs+ ++e r       g++  q+a++k+r + ++++
     fh22735   222    FQSCDYKAFYLGSMLIKELR-------GTESTQDACAKMRancqkst 261  

                   sekkkpqkvilsvSsdgvklidektkqvlaehplrrIsfcaadpqrwntG
                   + +kk  ++ilsvS +gvk id+ +k+++aeh +r+Is++a+dp      
     fh22735   262 EQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDP------ 305  

                   gdgstdddrvFgyiardpgssgSnrgtsrfaCHVFrcekaa.aedialai
                        +d+++F+yi++d  s        ++ CHVF   +++ a++i+l++
     fh22735   306 -----EDLSTFAYITKDLKSN-------HHYCHVFTAFDVNlAYEIILTL 343  

                   gqaFqvayelklkarse<-*
                   gqaF+vay+l+l+ar+    
     fh22735   344 GQAFEVAYQLALQARKG    360  

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