# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh22923.fasta.nr -Q fh22923.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh22923, 339 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6792935 sequences Expectation_n fit: rho(ln(x))= 6.5451+/-0.000217; mu= 4.6314+/- 0.012 mean_var=190.1865+/-36.632, 0's: 44 Z-trim: 114 B-trim: 354 in 1/66 Lambda= 0.093000 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|63101686|gb|AAH94832.1| Atonal homolog 8 (Droso ( 321) 2201 307.2 2.5e-81 gi|119619887|gb|EAW99481.1| atonal homolog 8 (Dros ( 321) 2197 306.6 3.6e-81 gi|74752138|sp|Q96SQ7.1|ATOH8_HUMAN Protein atonal ( 321) 2192 306.0 5.8e-81 gi|119903624|ref|XP_873292.2| PREDICTED: similar t ( 317) 1963 275.2 1e-71 gi|149036399|gb|EDL91017.1| similar to bHLH factor ( 322) 1846 259.6 5.5e-67 gi|81903257|sp|Q99NA2.1|ATOH8_MOUSE Protein atonal ( 322) 1830 257.4 2.4e-66 gi|114578580|ref|XP_001168598.1| PREDICTED: atonal ( 284) 1732 244.2 2e-62 gi|126344498|ref|XP_001376372.1| PREDICTED: simila ( 362) 1293 185.4 1.3e-44 gi|109103701|ref|XP_001084825.1| PREDICTED: simila ( 423) 1174 169.5 9e-40 gi|73980902|ref|XP_854844.1| PREDICTED: similar to ( 264) 1129 163.2 4.4e-38 gi|52545684|emb|CAH56263.1| hypothetical protein [ ( 263) 1102 159.6 5.4e-37 gi|26382527|dbj|BAC25499.1| unnamed protein produc ( 110) 689 103.7 1.5e-20 gi|118764116|gb|AAI28839.1| Zgc:158314 [Danio reri ( 181) 648 98.5 9.4e-19 gi|115732063|ref|XP_001203580.1| PREDICTED: hypoth ( 185) 442 70.9 2e-10 gi|115746598|ref|XP_787199.2| PREDICTED: hypotheti ( 482) 442 71.4 3.6e-10 gi|149476139|ref|XP_001518355.1| PREDICTED: simila ( 100) 431 69.0 3.8e-10 gi|118090812|ref|XP_001234980.1| PREDICTED: simila ( 101) 419 67.4 1.2e-09 gi|193912129|gb|EDW10996.1| GI16429 [Drosophila mo ( 347) 426 69.1 1.3e-09 gi|167873906|gb|EDS37289.1| bhlh factor math6 [Cul ( 321) 417 67.8 2.8e-09 gi|108875822|gb|EAT40047.1| bhlh factor math6 (ato ( 358) 416 67.8 3.3e-09 gi|157014156|gb|EAA14331.4| AGAP009983-PA [Anophel ( 380) 414 67.5 4.2e-09 gi|190615292|gb|EDV30816.1| GF14859 [Drosophila an ( 456) 394 64.9 3e-08 gi|194165322|gb|EDW80223.1| GK21091 [Drosophila wi ( 351) 387 63.8 4.9e-08 gi|193905434|gb|EDW04301.1| GH10058 [Drosophila gr ( 362) 385 63.6 6e-08 gi|190659981|gb|EDV57173.1| GG24687 [Drosophila er ( 369) 383 63.3 7.3e-08 gi|66771713|gb|AAY55168.1| IP14710p [Drosophila me ( 350) 376 62.4 1.4e-07 gi|194117907|gb|EDW39950.1| GL13900 [Drosophila pe ( 364) 376 62.4 1.4e-07 gi|194123296|gb|EDW45339.1| GM16704 [Drosophila se ( 365) 376 62.4 1.4e-07 gi|13172308|gb|AAK14073.1|AF303350_1 DNA-binding t ( 365) 376 62.4 1.4e-07 gi|54645421|gb|EAL34160.1| GA11011-PA [Drosophila ( 369) 376 62.4 1.4e-07 gi|194189589|gb|EDX03165.1| GD22993 [Drosophila si ( 365) 375 62.3 1.5e-07 gi|194173471|gb|EDW87082.1| GE16494 [Drosophila ya ( 369) 374 62.1 1.7e-07 gi|194155985|gb|EDW71169.1| GJ16214 [Drosophila vi ( 357) 372 61.8 2e-07 gi|156215303|gb|EDO36266.1| predicted protein [Nem ( 91) 360 59.5 2.6e-07 gi|91089007|ref|XP_967920.1| PREDICTED: similar to ( 238) 360 60.0 4.8e-07 gi|70570278|dbj|BAE06570.1| transcription factor p ( 205) 304 52.4 7.9e-05 gi|49647073|emb|CAG83460.1| unnamed protein produc ( 664) 292 51.5 0.00049 gi|149639753|ref|XP_001515835.1| PREDICTED: simila ( 564) 274 49.0 0.0024 gi|167418041|gb|EDR84742.1| conserved hypothetical ( 432) 270 48.3 0.0029 gi|5305335|gb|AAD41594.1|AF071081_1 proline-rich m ( 763) 272 48.9 0.0035 gi|51228143|emb|CAH17898.1| Protease-1 (PRT1) prot ( 902) 272 49.0 0.0038 gi|51214395|emb|CAH17856.1| Protease-1 (PRT1) prot ( 902) 272 49.0 0.0038 gi|10241798|emb|CAC09556.1| hypothetical protein S ( 889) 269 48.5 0.005 gi|163776038|gb|EDQ89660.1| predicted protein [Mon (2262) 275 49.9 0.0051 gi|73978259|ref|XP_539745.2| PREDICTED: similar to ( 369) 263 47.2 0.0051 gi|125599423|gb|EAZ38999.1| hypothetical protein O ( 387) 263 47.3 0.0053 gi|146448756|gb|EDK43144.1| hypothetical protein L (1505) 270 49.0 0.0063 gi|6649857|gb|AAF21601.1|AF009222_1 kexin-like ser ( 493) 258 46.7 0.0098 >>gi|63101686|gb|AAH94832.1| Atonal homolog 8 (Drosophil (321 aa) initn: 2201 init1: 2201 opt: 2201 Z-score: 1615.2 bits: 307.2 E(): 2.5e-81 Smith-Waterman score: 2201; 100.000% identity (100.000% similar) in 321 aa overlap (19-339:1-321) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::::::::::: gi|631 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT 10 20 30 40 70 80 90 100 110 120 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP 50 60 70 80 90 100 130 140 150 160 170 180 fh2292 EVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 EVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPAR 110 120 130 140 150 160 190 200 210 220 230 240 fh2292 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS 170 180 190 200 210 220 250 260 270 280 290 300 fh2292 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL 230 240 250 260 270 280 310 320 330 fh2292 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::::::::::::::: gi|631 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 290 300 310 320 >>gi|119619887|gb|EAW99481.1| atonal homolog 8 (Drosophi (321 aa) initn: 2197 init1: 2197 opt: 2197 Z-score: 1612.3 bits: 306.6 E(): 3.6e-81 Smith-Waterman score: 2197; 99.688% identity (100.000% similar) in 321 aa overlap (19-339:1-321) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::::::::::: gi|119 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT 10 20 30 40 70 80 90 100 110 120 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP 50 60 70 80 90 100 130 140 150 160 170 180 fh2292 EVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPAR .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPAR 110 120 130 140 150 160 190 200 210 220 230 240 fh2292 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS 170 180 190 200 210 220 250 260 270 280 290 300 fh2292 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL 230 240 250 260 270 280 310 320 330 fh2292 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::::::::::::::: gi|119 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 290 300 310 320 >>gi|74752138|sp|Q96SQ7.1|ATOH8_HUMAN Protein atonal hom (321 aa) initn: 2192 init1: 2192 opt: 2192 Z-score: 1608.7 bits: 306.0 E(): 5.8e-81 Smith-Waterman score: 2192; 99.688% identity (99.688% similar) in 321 aa overlap (19-339:1-321) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::::::::::: gi|747 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT 10 20 30 40 70 80 90 100 110 120 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP 50 60 70 80 90 100 130 140 150 160 170 180 fh2292 EVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPAR ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|747 EVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGPRPRILLCAPPAR 110 120 130 140 150 160 190 200 210 220 230 240 fh2292 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASS 170 180 190 200 210 220 250 260 270 280 290 300 fh2292 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 EIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSL 230 240 250 260 270 280 310 320 330 fh2292 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::::::::::::::: gi|747 ARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 290 300 310 320 >>gi|119903624|ref|XP_873292.2| PREDICTED: similar to At (317 aa) initn: 1023 init1: 1023 opt: 1963 Z-score: 1442.7 bits: 275.2 E(): 1e-71 Smith-Waterman score: 1963; 91.304% identity (95.031% similar) in 322 aa overlap (19-339:1-317) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::.:::::::::::::::::::::::::::::::::: gi|119 MKHIPVLQDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT 10 20 30 40 70 80 90 100 110 120 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP ::::::::: :.:::::::::.::::::.:::. : ::::: ::.::::::::.::: gi|119 FRLDLEAPEHGATATNGLRDRTQRLQPVPTPVPARV--APAVPSGGGADTAGERGGARAP 50 60 70 80 90 100 130 140 150 160 170 fh2292 EVSDARKRCFALGAVGPGLPTPPPPPPP-APQSQAPGGPEAQPFREPGLRPRILLCAPPA :: : ::: ::::::::::::::::::: :::.:.:::::.::::::::::::::::::: gi|119 EVLDPRKRGFALGAVGPGLPTPPPPPPPPAPQGQVPGGPETQPFREPGLRPRILLCAPPA 110 120 130 140 150 160 180 190 200 210 220 230 fh2292 RPAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAAS ::.:::::::: : .::::::::::::::::::::::::: ::::::::::::::::: gi|119 RPTPSAPPAPPEP---SVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATAAS 170 180 190 200 210 240 250 260 270 280 290 fh2292 SEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILS 220 230 240 250 260 270 300 310 320 330 fh2292 LARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE :::::::::::::::::::::::::::::::::::::::: gi|119 LARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 280 290 300 310 >>gi|149036399|gb|EDL91017.1| similar to bHLH factor Mat (322 aa) initn: 1039 init1: 947 opt: 1846 Z-score: 1357.8 bits: 259.6 E(): 5.5e-67 Smith-Waterman score: 1846; 87.462% identity (90.826% similar) in 327 aa overlap (19-339:1-322) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::.:::::::: gi|149 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPVRRANGYKT 10 20 30 40 70 80 90 100 110 fh2292 FRLDLEAPEPRAVA-----TNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERG ::::::::: :.: :::::::: :: :. .:::. ::::::: :::::: : gi|149 FRLDLEAPEFGATASATAATNGLRDRT---QPFPIATPVPASVAPAVPPGGGTDTAREFR 50 60 70 80 90 120 130 140 150 160 170 fh2292 GSRAPEVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLC : ::::::::::: ::::.:::::::::::: : :: ::: ::.::.:: .:::::::: gi|149 GIRAPEVSDARKRGFALGTVGPGLPTPPPPP--ASQSLAPGDPEVQPLREQALRPRILLC 100 110 120 130 140 150 180 190 200 210 220 230 fh2292 APPARPAPSAPPAPPA-PPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGE ::::::.:::: :::: : :: ::::::::::::::::::::::::: :::::::::::: gi|149 APPARPTPSAPLAPPAVPQESPVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGE 160 170 180 190 200 210 240 250 260 270 280 290 fh2292 ATAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIAC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ATAASTEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIAC 220 230 240 250 260 270 300 310 320 330 fh2292 NYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::::::::::::::::::::: gi|149 NYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 280 290 300 310 320 >>gi|81903257|sp|Q99NA2.1|ATOH8_MOUSE Protein atonal hom (322 aa) initn: 1022 init1: 954 opt: 1830 Z-score: 1346.2 bits: 257.4 E(): 2.4e-66 Smith-Waterman score: 1830; 87.156% identity (90.214% similar) in 327 aa overlap (19-339:1-322) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::.:::::::: gi|819 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPVRRANGYKT 10 20 30 40 70 80 90 100 110 fh2292 FRLDLEAPEPRAV-----ATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERG ::::::::: :. ::::::::: :: :. .:::. ::::::: :::::: : gi|819 FRLDLEAPELGATVSTTAATNGLRDRT---QPFPIATPVPASVAPAVPPGGGTDTAREFR 50 60 70 80 90 120 130 140 150 160 170 fh2292 GSRAPEVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLC : ::::::::::: ::::.:::::::::::: : :: ::: :::. ::: .:::::::: gi|819 GIRAPEVSDARKRGFALGTVGPGLPTPPPPP--ASQSLAPGDPEAHSFREQALRPRILLC 100 110 120 130 140 150 180 190 200 210 220 230 fh2292 APPARPAPSAPPAPPAPP-ESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGE ::::::. ::: :::: : :: ::::::::::::::::::::::::: :::::::::::: gi|819 APPARPTQSAPLAPPAAPQESPVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGE 160 170 180 190 200 210 240 250 260 270 280 290 fh2292 ATAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIAC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ATAASTEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIAC 220 230 240 250 260 270 300 310 320 330 fh2292 NYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::::::::::::::::::::: gi|819 NYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE 280 290 300 310 320 >>gi|114578580|ref|XP_001168598.1| PREDICTED: atonal hom (284 aa) initn: 1010 init1: 953 opt: 1732 Z-score: 1275.7 bits: 244.2 E(): 2e-62 Smith-Waterman score: 1732; 97.701% identity (97.701% similar) in 261 aa overlap (19-276:1-260) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :::::::::::::::::::::::::::::::::::::::::: gi|114 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT 10 20 30 40 70 80 90 100 110 120 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAP 50 60 70 80 90 100 130 140 150 160 170 fh2292 EVSDARKRCFALGAVGPGLPTPPPPPPP---APQSQAPGGPEAQPFREPGLRPRILLCAP :::::::::::::::::::::::::::: :::::: :::::::::::::::::::::: gi|114 EVSDARKRCFALGAVGPGLPTPPPPPPPPPPAPQSQATGGPEAQPFREPGLRPRILLCAP 110 120 130 140 150 160 180 190 200 210 220 230 fh2292 PARPAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATA ::::::::::::::: :::::::::::::::::::::::::::: ::::::::::::::: gi|114 PARPAPSAPPAPPAP-ESTVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATA 170 180 190 200 210 220 240 250 260 270 280 290 fh2292 ASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYI ::::::::::::::::::::::::::::::::::::::: gi|114 ASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPAPRRTPSLRRGTTAGMGGRVA 230 240 250 260 270 280 300 310 320 330 fh2292 LSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE gi|114 GAG >>gi|126344498|ref|XP_001376372.1| PREDICTED: similar to (362 aa) initn: 831 init1: 831 opt: 1293 Z-score: 956.3 bits: 185.4 E(): 1.3e-44 Smith-Waterman score: 1293; 63.830% identity (76.596% similar) in 329 aa overlap (19-338:1-324) 10 20 30 40 50 60 fh2292 ARRRPGQPHAPASRAARAMKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKT :: .:.:: ::: ..:.::.. :::::: : ::.: ::. gi|126 MKSLPTLEGGPWPSLCIKEVSCPKKLKRKPPEGPRRVNVYKS 10 20 30 40 70 80 90 100 110 fh2292 FRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPP----RGGTDTAGERGG :: ::..::: :.::::.::.:: :. . : : . : . :. : :: gi|126 FREDLKVPEP---AANGLRERTERLLPAK-GASVAVARSGESPELMLLSADRDSRGCSGG 50 60 70 80 90 120 130 140 150 160 170 fh2292 SRAPEVSDARKRCFALGAVGPGLPTPPPPPPP---APQSQAPGGPEAQPFREPGLRPRIL :. :: : ::::: : : ::: ::: :: :: .. : :: : : ..: ::. gi|126 PRGSEVLDMRKRCFPPGP-GRGLPPSPPPLPPGPAAPLGSRDGREAAQTFGEQSVRSRIV 100 110 120 130 140 150 180 190 200 210 220 230 fh2292 LCAPPAR-PAPSA-PPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKR :: :: : :::. :: :::: . ::: ::. ::.::::::::.:. ..::::::: gi|126 LCPPPPRQPAPQPQPPPPPAPQPQPQPPAPQPRPAGSSFSSISHVIYTNNPEASASPRKR 160 170 180 190 200 210 240 250 260 270 280 290 fh2292 PGEATAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILR ::....::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|126 LGESAGVSSEIKAIQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILR 220 230 240 250 260 270 300 310 320 330 fh2292 IACNYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE :::::::::::::::::::::::.::::::..::::::::::.:::: gi|126 IACNYILSLARLADLDYSADHSNMSFSECVEQCTRTLQAEGRSKKRKVKNGASRPLIVDL 280 290 300 310 320 330 gi|126 MRYWPITAVSASFVWRKFLSKFWAS 340 350 360 >>gi|109103701|ref|XP_001084825.1| PREDICTED: similar to (423 aa) initn: 1174 init1: 1174 opt: 1174 Z-score: 869.2 bits: 169.5 E(): 9e-40 Smith-Waterman score: 1180; 79.325% identity (83.966% similar) in 237 aa overlap (106-339:203-423) 80 90 100 110 120 130 fh2292 NGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAPEV---SDARKRCFAL :: . :. : : .: . : . .: ..: gi|109 AVAGSPASSAFLVHGGGVLWQVRVDWVAVSGGCGSPGNSGVSPSPSARSRSPSSRRFLSL 180 190 200 210 220 230 140 150 160 170 180 190 fh2292 GAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAP : .: . ::::::.::::::::::::::::::: :::: :: gi|109 GELG----------------RREWREEAQPFRKPGLRPRILLCAPPARPAPSEPPAPQAP 240 250 260 270 200 210 220 230 240 250 fh2292 PESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQTRRLL ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|109 PESTVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATAASSEIKALQQTRRLL 280 290 300 310 320 330 260 270 280 290 300 310 fh2292 ANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADH 340 350 360 370 380 390 320 330 fh2292 SNLSFSECVQRCTRTLQAEGRAKKRKE ::::::::::::::::::::::::::: gi|109 SNLSFSECVQRCTRTLQAEGRAKKRKE 400 410 420 >>gi|73980902|ref|XP_854844.1| PREDICTED: similar to ato (264 aa) initn: 991 init1: 991 opt: 1129 Z-score: 838.8 bits: 163.2 E(): 4.4e-38 Smith-Waterman score: 1129; 94.444% identity (97.778% similar) in 180 aa overlap (159-338:53-229) 130 140 150 160 170 180 fh2292 CFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPA .::::::::::::::::::::::. ::: gi|739 GLIPEDHDDLSTADICQEEQFFRRLAQEAAQAQPFREPGLRPRILLCAPPARPT---PPA 30 40 50 60 70 190 200 210 220 230 240 fh2292 PPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQT ::::::...:::::::::::::::::::::::: ::::::::::::::::.::::::::: gi|739 PPAPPEASARPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATAAASEIKALQQT 80 90 100 110 120 130 250 260 270 280 290 300 fh2292 RRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDY 140 150 160 170 180 190 310 320 330 fh2292 SADHSNLSFSECVQRCTRTLQAEGRAKKRKE :::::::::::::::::::::::::::::: gi|739 SADHSNLSFSECVQRCTRTLQAEGRAKKRKASNRASKMSLFEVLGVAPASELLTQLGLWE 200 210 220 230 240 250 339 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 02:11:11 2008 done: Sun Aug 10 02:13:47 2008 Total Scan time: 777.510 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]