hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02152462/chunk_1/iprscan-20080810-02152462.nocrc
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Query sequence: fh22923
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  61.1    1.4e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     254   306 ..     1    61 []    61.1  1.4e-13

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 254 to 306: score 61.1, E = 1.4e-13
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      narER   R++ i   af++Lr+ vP+       ++KlsK++iLr A
     fh22923   254    NARER--TRVHTISA-AFEALRKQVPCYS----YGQKLSKLAILRIA 293  

                   ieYIrksLqeqlqe<-*
                   ++YI  sL ++ +    
     fh22923   294 CNYI-LSLARLADL    306  

//