hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02345245/chunk_1/iprscan-20080810-02345245.nocrc
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Query sequence: fh23202
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00490                                                 113.2    2.9e-29   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00490      1/1     181   268 ..     1    86 []   113.2  2.9e-29

Alignments of top-scoring domains:
SM00490: domain 1 of 1, from 181 to 268: score 113.2, E = 2.9e-29
                   *->delaelLkellkdpgikvarlHGglsqeeReeilekFrkgkikvLva
                       +la +L+++    g+ va l G+++ e+R +++e+Fr+gk kvLv+
     fh23202   181    SWLAAELSKE----GHQVALLSGEMMVEQRAAVIERFREGKEKVLVT 223  

                   TdvaerGlDipgvdlVInydl......pwspasyiQRiGRaGRaG<-*
                   T+v +rG+D+ +v++VIn+dl+ ++++  + ++y++RiGR+GR+G   
     fh23202   224 TNVCARGIDVEQVSVVINFDLpvdkdgNPDNETYLHRIGRTGRFG    268  

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