hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02404999/chunk_1/iprscan-20080810-02404999.nocrc
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Query sequence: fh23250
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07690.6.fs Major Facilitator Superfamily                  129.8    2.9e-36   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07690.6.fs   1/1     132   335 ..     1   233 [.   129.8  2.9e-36

Alignments of top-scoring domains:
PF07690.6.fs: domain 1 of 1, from 132 to 335: score 129.8, E = 2.9e-36
                   *->lflaaflaglgrsllgpalpylassleesslgqtdllspteiglllt
                      l+ +++l++++r++++++lp +    +   ++    +  +  gl+ t
     fh23250   132    LCYINLLNYMDRFTVAGVLPDIE---QF--FN----IGDSSSGLIQT 169  

                   afalgyalaqplaGrlsDrfGrrvyirlkpvlllglllfalgslllafas
                   +f   y +++p++G+l+Dr++r+   +   ++  g+++++l +l + f++
     fh23250   170 VFISSYMVLAPVFGYLGDRYNRK---Y---LMCGGIAFWSLVTLGSSFIP 213  

                   stslwllliarallqGlgagllapaaaaliadwfppeergralgivsagf
                     ++wlll++r l  G+g++++ + a +liad+f  ++r+r+l+i++ ++
     fh23250   214 GEHFWLLLLTRGL-VGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAI 262  

                   glGaalggpllggllaalgwwwssgtfWraaFlilgilallaallllvlf
                   ++G+  +g ++g+ + +  +       W++a  +  +l+++a+ll  +++
     fh23250   263 PVGSG-LGYIAGSKVKDMAGD------WHWALRVTPGLGVVAVLL--LFL 303  

                   llpeppakasgkpeeeeagialr.lll.p.lllillalf<-*
                   +++epp+ a ++        +  ++l++ + +++l al+   
     fh23250   304 VVREPPRGAVERH-------SDLpPLNpTsWWADLRALA    335  

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