hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02583330/chunk_1/iprscan-20080810-02583330.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: fh23344
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                          30.0    7.6e-06   1
PF00096.16.fs Zinc finger, C2H2 type                          28.0    9.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   1/1      67    91 ..     1    24 []    28.0  9.8e-06
PF00096.16.ls   1/1      67    91 ..     1    24 []    30.0  7.6e-06

Alignments of top-scoring domains:
PF00096.16.fs: domain 1 of 1, from 67 to 91: score 28.0, E = 9.8e-06
                   *->ykCpf.dCgksFsrksnLkrHlrtH<-*
                      y C++++C k+++++s+L++H + H   
     fh23344    67    YACQIpGCTKRYTDPSSLRKHVKAH    91   

PF00096.16.ls: domain 1 of 1, from 67 to 91: score 30.0, E = 7.6e-06
                   *->ykCpf.dCgksFsrksnLkrHlrtH<-*
                      y C++++C k+++++s+L++H + H   
     fh23344    67    YACQIpGCTKRYTDPSSLRKHVKAH    91   

//