hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-02583330/chunk_1/iprscan-20080810-02583330.nocrc
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Query sequence: fh23344
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                  28.3      0.001   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/1      67    91 ..     1    23 []    28.3    0.001

Alignments of top-scoring domains:
SM00355: domain 1 of 1, from 67 to 91: score 28.3, E = 0.001
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                      y C+i+gC k+++++++L++H++ H   
     fh23344    67    YACQIpGCTKRYTDPsSLRKHVKAH    91   

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