hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-03103497/chunk_1/iprscan-20080810-03103497.nocrc
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Query sequence: fh23820
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF02902.9.fs  Ulp1 protease family, C-terminal cataly   196.5    1.6e-60   1
PF02902.9.ls  Ulp1 protease family, C-terminal cataly   198.4    1.6e-56   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF02902.9.fs    1/1     750  1026 ..     1   245 []   196.5  1.6e-60
PF02902.9.ls    1/1     750  1026 ..     1   245 []   198.4  1.6e-56

Alignments of top-scoring domains:
PF02902.9.fs: domain 1 of 1, from 750 to 1026: score 196.5, E = 1.6e-60
                   *->isitmrdlktltkkewlnDtiidfylrylaerllpdPilkekftsal
                        +t++dl++l+++e+lnD iidfyl+yl++++       +++  ++
     fh23820   750    LGVTNEDLECLEEGEFLNDVIIDFYLKYLILEK------ASDELVER 790  

                   thffnsFfytklksrfkwgd.e......kdelykdvkrgtargekkkkkd
                   +h+f+sFfy++l+++     +++++ +  ++++k+v+++t      ++  
     fh23820   791 SHIFSSFFYKCLTRKENNLTeDnpnlsmAQRRHKRVRTWT------RHIN 834  

                   lfdkDyiyvPinedgkksHWvllvIdlpdkkk..................
                   +f+kDyi+vP+ne +   HW+l+vI+ p  +    ++ +++ +++++ ++
     fh23820   835 IFNKDYIFVPVNESS---HWYLAVICFPWLEEavyedfpqtvsqqsqaqq 881  

                   ......................................kdqstivilDSl
                   +++++++ +++ +++++ + + +++++++++ + +++ ++ ++i ilDSl
     fh23820   882 sqndnktidndlrttstlslsaedsqstesnmsvpkkmCKRPCILILDSL 931  

                   islntekavktitalarplsdelpylkrerlslkksfdkkswdlqpfeik
                      +  + v    +l+++l++e++          + f+k++++       
     fh23820   932 KAASVQNTVQ---NLREYLEVEWEVKLKT----HRQFSKTNMV------- 967  

                   rltmkvPQQpngyDCGiyvlkfielfaegppqdfmttindkklkdlksfr
                    l++kvP+Q n++DCG+y l+++e f+ +p+  f ++i   + k+ ++  
     fh23820   968 DLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIH--LEKWFPRHV 1015 

                   kklakeiyeel<-*
                   +k+++e+++el   
     fh23820  1016 IKTKREDIREL    1026 

PF02902.9.ls: domain 1 of 1, from 750 to 1026: score 198.4, E = 1.6e-56
                   *->isitmrdlktltkkewlnDtiidfylrylaerllpdPilkekftsal
                        +t++dl++l+++e+lnD iidfyl+yl++++       +++  ++
     fh23820   750    LGVTNEDLECLEEGEFLNDVIIDFYLKYLILEK------ASDELVER 790  

                   thffnsFfytklksrfkwgd.e......kdelykdvkrgtargekkkkkd
                   +h+f+sFfy++l+++     +++++ +  ++++k+v+++t      ++  
     fh23820   791 SHIFSSFFYKCLTRKENNLTeDnpnlsmAQRRHKRVRTWT------RHIN 834  

                   lfdkDyiyvPinedgkksHWvllvIdlpdkkk..................
                   +f+kDyi+vP+ne +   HW+l+vI+ p  +    ++ +++ +++++ ++
     fh23820   835 IFNKDYIFVPVNESS---HWYLAVICFPWLEEavyedfpqtvsqqsqaqq 881  

                   ......................................kdqstivilDSl
                   +++++++ +++ +++++ + + +++++++++ + +++ ++ ++i ilDSl
     fh23820   882 sqndnktidndlrttstlslsaedsqstesnmsvpkkmCKRPCILILDSL 931  

                   islntekavktitalarplsdelpylkrerlslkksfdkkswdlqpfeik
                      +  + v    +l+++l++e++          + f+k++++       
     fh23820   932 KAASVQNTVQ---NLREYLEVEWEVKLKT----HRQFSKTNMV------- 967  

                   rltmkvPQQpngyDCGiyvlkfielfaegppqdfmttindkklkdlksfr
                    l++kvP+Q n++DCG+y l+++e f+ +p+  f ++i   + k+ ++  
     fh23820   968 DLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIH--LEKWFPRHV 1015 

                   kklakeiyeel<-*
                   +k+++e+++el   
     fh23820  1016 IKTKREDIREL    1026 

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