hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-03224228/chunk_1/iprscan-20080810-03224228.nocrc
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Query sequence: fh24387
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03736.7.ls EPTP domain                                    171.8    1.6e-48   2
PF03736.7.fs EPTP domain                                    168.0    2.3e-47   2
PF01463.14.fs Leucine rich repeat C-terminal domain           14.4     0.0016   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01463.14.fs   1/1      34    59 ..     1    26 []    14.4   0.0016
PF03736.7.fs   1/2      63   103 ..     1    44 []    74.6    3e-19
PF03736.7.ls   1/2      63   103 ..     1    44 []    76.5  7.9e-20
PF03736.7.fs   2/2     257   298 ..     1    44 []    93.4  6.3e-25
PF03736.7.ls   2/2     257   298 ..     1    44 []    95.3  1.6e-25

Alignments of top-scoring domains:
PF01463.14.fs: domain 1 of 1, from 34 to 59: score 14.4, E = 0.0016
                   *->dlrCasPeslrGqplldlppsdfsCp<-*
                      d++C++P++++ + + +l ++df+C    
     fh24387    34    DIYCEGPPEYKKRKINSLSSKDFDCI    59   

PF03736.7.fs: domain 1 of 2, from 63 to 103: score 74.6, E = 3e-19
                   *->FvlhqdlPnvedvlavkhFsaggDvYLaLaqpigrldSlvlrWd<-*
                      F+++qdlP  +++l++++Fs+ +D+Y+++aqp+++ ++++l+Wd   
     fh24387    63    FAKSQDLP--YQSLSIDTFSYLNDEYVVIAQPFTG-KCIFLEWD    103  

PF03736.7.ls: domain 1 of 2, from 63 to 103: score 76.5, E = 7.9e-20
                   *->FvlhqdlPnvedvlavkhFsaggDvYLaLaqpigrldSlvlrWd<-*
                      F+++qdlP  +++l++++Fs+ +D+Y+++aqp+++ ++++l+Wd   
     fh24387    63    FAKSQDLP--YQSLSIDTFSYLNDEYVVIAQPFTG-KCIFLEWD    103  

PF03736.7.fs: domain 2 of 2, from 257 to 298: score 93.4, E = 6.3e-25
                   *->FvlhqdlPnvedvlavkhFsaggDvYLaLaqpigrldSlvlrWd<-*
                      F++++d+Pn+edv+avkhFs++gDvY++L+++ig  dS+v++W+   
     fh24387   257    FTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIG--DSKVMKWG    298  

PF03736.7.ls: domain 2 of 2, from 257 to 298: score 95.3, E = 1.6e-25
                   *->FvlhqdlPnvedvlavkhFsaggDvYLaLaqpigrldSlvlrWd<-*
                      F++++d+Pn+edv+avkhFs++gDvY++L+++ig  dS+v++W+   
     fh24387   257    FTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIG--DSKVMKWG    298  

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