hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-04004140/chunk_1/iprscan-20080810-04004140.nocrc
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Query sequence: fh25424
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01433.10.fs Peptidase family M1                        301.2   3.1e-106   1
PF01433.10.ls Peptidase family M1                        -51.9    5.7e-10   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01433.10.ls   1/1       1   154 [.     1   438 []   -51.9  5.7e-10
PF01433.10.fs   1/1       3   154 ..   275   438 .]   301.2 3.1e-106

Alignments of top-scoring domains:
PF01433.10.ls: domain 1 of 1, from 1 to 154: score -51.9, E = 5.7e-10
                   *->LPttvkPlhYdLtlkpkFgnlpekpntdgnftFsGsvtItltlqatk
                                            ++              +++      
     fh25424     1    ----------------------SF--------------LSF------ 5    

                   aatdeIvLhakdltissevrvalvlvngdqklpesvefdlqsetdlavdd
                                                                     
     fh25424     - -------------------------------------------------- -    

                   nkekltinlpealsagqgpytLkIeyegklndismlGfYrseYtdgkdge
                                                                     
     fh25424     - -------------------------------------------------- -    

                   kkymatTQfeeptdARraFPCfDEPafKATFtitiihpekgttalSNmpv
                           f+                                        
     fh25424     6 --------FQ---------------------------------------- 7    

                   isttkdddgptrvittFetTpkMStYLlAfvVGeleyietetkdgydarl
                                                                     
     fh25424     - -------------------------------------------------- -    

                   vpvrvyarpgainagqgqyalevgqklleffedyfgipYplpanlklDqv
                               n                    yf+i+Ypl+   klD+v
     fh25424     8 ------------N--------------------YFEIQYPLK---KLDLV 22   

                   AvPdFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeViAHELAHQW
                   A+PdF aGAMENWGL+T+re++LLyd ++ss++d++ V+ +iAHELAHQW
     fh25424    23 AIPDFEAGAMENWGLLTFREETLLYDSNTSSMADRKLVTKIIAHELAHQW 72   

                   FGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfvlrddvv
                   FGNLVTmkWW+dLWLNEGFAt+mEy++++++  ++e  +++ f+  +++ 
     fh25424    73 FGNLVTMKWWNDLWLNEGFATFMEYFSLEKI--FKELSSYEDFLD-ARF- 118  

                   qlalasDslgsshPitnklvevntpaeiseiFdsaisYeKG<-*
                    + ++ Dsl+sshPi+   ++v+++++i+e+Fd + sY KG   
     fh25424   119 -KTMKKDSLNSSHPIS---SSVQSSEQIEEMFD-SLSYFKG    154  

PF01433.10.fs: domain 1 of 1, from 3 to 154: score 301.2, E = 3.1e-106
                   *->leffedyfgipYplpanlklDqvAvPdFsaGAMENWGLiTyrepaLL
                      l ff++yf+i+Ypl+   klD+vA+PdF aGAMENWGL+T+re++LL
     fh25424     3    LSFFQNYFEIQYPLK---KLDLVAIPDFEAGAMENWGLLTFREETLL 46   

                   ydprsssnsdkqrVaeViAHELAHQWFGNLVTmkWWddLWLNEGFAtymE
                   yd ++ss++d++ V+ +iAHELAHQWFGNLVTmkWW+dLWLNEGFAt+mE
     fh25424    47 YDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFME 96   

                   ylgtdelggepewnieaqfvlrddvvqlalasDslgsshPitnklvevnt
                   y++++++  ++e  +++ f+  +++  + ++ Dsl+sshPi+   ++v++
     fh25424    97 YFSLEKI--FKELSSYEDFLD-ARF--KTMKKDSLNSSHPIS---SSVQS 138  

                   paeiseiFdsaisYeKG<-*
                   +++i+e+Fd + sY KG   
     fh25424   139 SEQIEEMFD-SLSYFKG    154  

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