hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-04130106/chunk_1/iprscan-20080810-04130106.nocrc
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Query sequence: fh25839
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00336                                                  46.6    3.3e-09   1
SM00184                                                  27.9     0.0014   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      85   119 ..     1    23 []    27.9   0.0014
SM00336    1/1     152   194 ..     1    51 []    46.6  3.3e-09

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 85 to 119: score 27.9, E = 0.0014
                   *->CpICle....pvvlpCgH.FCr.Ci......CPlC<-*
                      C  C  + + p++lpC H+ C +C++ ++ +CP+C   
     fh25839    85    CQQCQAeakcPKLLPCLHtLCSgCLeasgmqCPIC    119  

SM00336: domain 1 of 1, from 152 to 194: score 46.6, E = 3.3e-09
                   *->eraplCeeHgdeepaeffCveedgallCrdCdeageHqanklfrgHr
                      +++ +C++++  e a f+C  e+++llC+ C ea  H   ++f +H+
     fh25839   152    DAQAVCTRCK--ESADFWC-FECEQLLCAKCFEA--H---QWFLKHE 190  

                   vvll<-*
                    ++l   
     fh25839   191 ARPL    194  

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