hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20100311/iprscan-20100311-17583323/chunk_1/iprscan-20100311-17583323.nocrc
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Query sequence: fh25931
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00675 dcm: DNA-cytosine methyltransferase             46.0    3.8e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00675   1/1    1128  1582 ..     1   425 []    46.0  3.8e-16

Alignments of top-scoring domains:
TIGR00675: domain 1 of 1, from 1128 to 1582: score 46.0, E = 3.8e-16
                   *->vidLFaGiGGirLGFEqagkeltvafkcVfasEiPRdkyAqkTYeaN
                      + d F+G+GG++ GF+qag     + ++ +a E   +  A+  ++ N
     fh25931  1128    TLDVFSGCGGLSEGFHQAG-----ISDTLWAIEM--WDPAAQAFRLN 1167 

                   FgndekvpfgDItkispsdllr............hiaiPDfDiLlgGFPC
                    + + +v++ D + +    +l   ++++++++++    +D+++L+gG+PC
     fh25931  1168 NP-GSTVFTEDCNILL---KLVmagettnsrgqrLPQKGDVEMLCGGPPC 1213 

                   QpFS.iAGkrkgelGFedEDtRGtLFFeivRilKeKkPkfFlLENVkGLv
                   Q+FS++++ +   +++     ++ L+  +  +   ++P+fFlLENV++ v
     fh25931  1214 QGFSgMNRFNS--RTYS--KFKNSLVVSFLSYCDYYRPRFFLLENVRNFV 1259 

                   sHDksqrGrTFkvIietLeelGYkVeykeVLNAkdFGNvPQnReRiYIVG
                   s  +      +k  +  L ++GY   +  VL A  +G v+Q R+R +I +
     fh25931  1260 SFKR---SMVLKLTLRCLVRMGYQCTFG-VLQAGQYG-VAQTRRRAIILA 1304 

                   frkdlpklkestdfddklnFeFPkpielkgkvakkkrigdlldksvdlee
                               + ++  +F++P +       +++  +     + v  ++
     fh25931  1305 AA----------PGEKLPLFPEPLHVF----APRACQLS----VVV--DD 1334 

                   kyylseekknglllllenmrkkegslakiliWmDgrvgtgeqlgseN...
                   k ++s++       +l+ +++++               t+++++s   ++
     fh25931  1335 KKFVSNI------TRLSSGPFRT--------------ITVRDTMS-Dlpe 1363 

                   .......................vddgfynreskssilrtlsadkikkgy
                    +++ +  + + ++++++  ++++ ++ y ++  ++i++  sa       
     fh25931  1364 vrngasaleisyngepqswfqrqLRGAQYQPILRDHICKDMSA------- 1406 

                   legssGkgrelavsikladkeytfvkggksvliv................
                                          +v +++   i   ++++ ++ ++ + +
     fh25931  1407 -----------------------LVAARMR-HIPlapgsdwrdlpnievr 1432 

                   ..................................................
                    ++++  ++ + +++++++++++++  ++  +  +++++++  ++  ++ 
     fh25931  1433 lsdgtmarklrythhdrkngrsssgalrgvcscveggssgkacdpaarqf 1482 

                   .......................lkfldpdevaitlsesdphkvivelvh
                   ++  +   +++++++++  +  ++  +d    + t++   p +++  + h
     fh25931  1483 ntlipwclphtgnrhnhwaglygRLEWDG-FFSTTVTNPEPMGKQGRVLH 1531 

                   kgriRrLTpREcaRLQGFPdddtekFefpgvsdsqlYkQaGNsVvVpVie
                   +++ R  ++REcaR QGFPd+    +++ g ++ +  +Q+GN+V++p+++
     fh25931  1532 PEQHRVVSVRECARSQGFPDT----YRLFG-NILDKHRQVGNAVPPPLAK 1576 

                   aIAkai<-*
                   aI+ +i   
     fh25931  1577 AIGLEI    1582 

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