hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-04383595/chunk_1/iprscan-20080810-04383595.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: fh26186
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00146                                                 401.2   5.8e-116   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00146      1/1     169   456 .]     1   336 []   401.2 5.8e-116

Alignments of top-scoring domains:
SM00146: domain 1 of 1, from 169 to 456: score 401.2, E = 5.8e-116
                   *->avIfKggDDLRQDalvlQllrlmdklLkkdsetrrldLhlrpYkvlp
                       +++K++DDLR+D++ +++++l++k+L+kd+e+rr+ Lh+r+Y+v+p
     fh26186   169    IMMCKPKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIP 215  

                   tgpksGliEvvpnsetlheIlkelrkkkkipldykqlfmldmlvaeieka
                   +++++G+iE+v+n++ l++Il +l+k+k++++++k+l++           
     fh26186   216 LNDECGIIEWVNNTAGLRPILTKLYKEKGVYMTGKELRQ----------- 254  

                   qyptitlakakkkalrykhatlleklkvfegatsafkppvLydwfkekfp
                                ++ +k a+l+eklkvf++ + + +pp++++wf+++fp
     fh26186   255 -------------CMLPKSAALSEKLKVFREFLLPRHPPIFHEWFLRTFP 291  

                   dpneiyfeardnFtrScAgySvvtYiLGlGDRHndNImldrktGhlfHID
                   dp  +++++r+ ++rS+A++S+v+YiLGlGDRH++NI++d  tG+++H+D
     fh26186   292 DP-TSWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVD 340  

                   FGfilgngpklpgfklfgRErvPFrLTpemvdvmGgGgkpsgvfglFrsl
                   F++++++g++++++     E vPFrLT++mv++mG    p+g +glFr+ 
     fh26186   341 FNCLFNKGETFEVP-----EIVPFRLTHNMVNGMG----PMGTEGLFRRA 381  

                   CerayralRknsnllmnllelMlsdglmpewrsg..ekdikylrerlrld
                   Ce ++r++R +++ lm++l ++l+d+l  ew++  +++++++l+e+ ++ 
     fh26186   382 CEVTMRLMRDQREPLMSVLKTFLHDPL-VEWSKPvkGHSKAPLNETGEVV 430  

                   vlsdeeaaeyfkktektkliessleslttrlndlfhllaql<-*
                     +++ +++y            s   + + l+   +l +ql   
     fh26186   431 --NEKVSRRY------------S-LIWAVVLISTNELDMQL    456  

//