hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-14322933/chunk_1/iprscan-20090525-14322933.nocrc
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Query sequence: fh26309
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 188.9    4.7e-52   1
SM00234                                                 157.4    1.4e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00324    1/1     637   828 ..     1   193 []   188.9  4.7e-52
SM00234    1/1     871  1073 ..     1   248 []   157.4  1.4e-42

Alignments of top-scoring domains:
SM00324: domain 1 of 1, from 637 to 828: score 188.9, E = 4.7e-52
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      +p+P+ ++++ +yl++++ld++G++R+sG+ksr+ +Lr++ ++ +++
     fh26309   637    QPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPEn 683  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +             ++e+++++dvA+++K+++R+LPePL+t +l+e f+ 
     fh26309   684 V-------------NYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLH 720  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                   +++                ++e+rl+a++ ++ lL ++nr++L+ Ll +L
     fh26309   721 IYQY--------------VSKEQRLQAVQAAILLLADENREVLQTLLcFL 756  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.....................
                   n V +  e+N Mt+ NLA++++P+L++ +  +++++++  +++  +++++
     fh26309   757 NDVVNLVEENQMTPMNLAVCLAPSLFHLNllkkessprviqkkyatgkpd 806  

                   ...ltdikhqnkvvetlienad<-*
                   +++l ++   ++ + ++i+++d   
     fh26309   807 qkdLNENLAAAQGLAHMIMECD    828  

SM00234: domain 1 of 1, from 871 to 1073: score 157.4, E = 1.4e-42
                   *->evaeeaanellklaassekgWvlspetgeiengdevlsiledgqnpk
                       + + + ++l k+a++++kgWv  +   +  n d +++++       
     fh26309   871    TYLNHLIQGLQKEAKEKFKGWVTCS---STDNTDLAFKKVG------ 908  

                   qglkvsgealravgvvpmvcaedlvaellddgey.rkeWdknfagivska
                        +g +l+++++  +v a   +  +l++ +++r++Wd++f       
     fh26309   909 -----DGNPLKLWKASVEVEA--PPSVVLNRVLReRHLWDEDFV----QW 947  

                   evvevissgtGgnrngviyhyvaksvapgpvsPtRDfvfvRywreddeHR
                   +vve+++ +      ++iy+yv++s+a  p++  RDfv++R w+ d    
     fh26309   948 KVVETLDRQ------TEIYQYVLNSMA--PHPS-RDFVVLRTWKTD---- 984  

                   alvdgsyvivsvSvthetspptGpssgvvRaellpsgllieplgngpekd
                    l+ g + +vs Sv he+   +    g+vRa +  s++liep+g g+   
     fh26309   985 -LPKGMCTLVSLSVEHEEAQLL----GGVRAVVMDSQYLIEPCGSGK--- 1026 

                   dvkskvtwvsqaDlkGwlPvvhwllrsliksglaefaktRDsvatlqksc
                      s++t+++++DlkG++P  +w+ + +++ ++ae+a++R s++ l +++
     fh26309  1027 ---SRLTHICRIDLKGHSP--EWYSKGFGHLCAAEVARIRNSFQPLIAEG 1071 

                   ek<-*
                    +   
     fh26309  1072 PE    1073 

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