# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj00292.fasta.nr -Q fj00292.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj00292, 950 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6821020 sequences Expectation_n fit: rho(ln(x))= 5.5299+/-0.000186; mu= 12.3693+/- 0.010 mean_var=75.7812+/-14.809, 0's: 47 Z-trim: 77 B-trim: 110 in 1/65 Lambda= 0.147331 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087936|dbj|BAD92415.1| protocadherin gamma su ( 950) 6171 1321.6 0 gi|37999837|sp|Q9Y5G7.1|PCDG6_HUMAN Protocadherin ( 932) 6035 1292.7 0 gi|127138659|ref|NP_001076033.1| protocadherin gam ( 932) 6016 1288.6 0 gi|62510867|sp|Q5DRB4.1|PCDG6_PANTR Protocadherin ( 932) 6012 1287.8 0 gi|5457074|gb|AAD43773.1|AF152513_1 protocadherin ( 818) 5198 1114.7 0 gi|114602357|ref|XP_001149666.1| PREDICTED: protoc ( 818) 5179 1110.7 0 gi|109079006|ref|XP_001088343.1| PREDICTED: simila ( 838) 4937 1059.3 0 gi|148678196|gb|EDL10143.1| mCG133388, isoform CRA ( 932) 4864 1043.8 0 gi|13876338|gb|AAK26089.1| protocadherin gamma A6 ( 932) 4853 1041.4 0 gi|149017326|gb|EDL76377.1| rCG49295, isoform CRA_ ( 929) 4783 1026.6 0 gi|127139358|ref|NP_001076029.1| protocadherin gam ( 962) 4690 1006.8 0 gi|62510869|sp|Q5DRB6.1|PCDG4_PANTR Protocadherin ( 931) 4686 1005.9 0 gi|37999839|sp|Q9Y5G9.1|PCDG4_HUMAN Protocadherin ( 931) 4667 1001.9 0 gi|62510866|sp|Q5DRB3.1|PCDG7_PANTR Protocadherin ( 932) 4667 1001.9 0 gi|62510870|sp|Q5DRB7.1|PCDG3_PANTR Protocadherin ( 932) 4659 1000.2 0 gi|50417635|gb|AAH77712.1| Protocadherin gamma sub ( 935) 4659 1000.2 0 gi|119582340|gb|EAW61936.1| hCG1982215, isoform CR ( 932) 4658 1000.0 0 gi|13876340|gb|AAK26090.1| protocadherin gamma A7 ( 935) 4653 998.9 0 gi|37999840|sp|Q9Y5H0.1|PCDG3_HUMAN Protocadherin ( 932) 4652 998.7 0 gi|50512410|gb|AAT77600.1| protocadherin gamma a7 ( 934) 4648 997.9 0 gi|62087434|dbj|BAD92164.1| protocadherin gamma su ( 961) 4647 997.7 0 gi|37999836|sp|Q9Y5G6.1|PCDG7_HUMAN Protocadherin ( 932) 4645 997.2 0 gi|148678182|gb|EDL10129.1| mCG133388, isoform CRA ( 935) 4644 997.0 0 gi|62510865|sp|Q5DRB2.1|PCDG8_PANTR Protocadherin ( 932) 4600 987.7 0 gi|29436767|gb|AAH49814.1| Protocadherin gamma sub ( 930) 4593 986.2 0 gi|62510871|sp|Q5DRB8.1|PCDG2_PANTR Protocadherin ( 932) 4590 985.5 0 gi|37999835|sp|Q9Y5G5.1|PCDG8_HUMAN Protocadherin ( 932) 4589 985.3 0 gi|149017319|gb|EDL76370.1| rCG49295, isoform CRA_ ( 930) 4588 985.1 0 gi|148678175|gb|EDL10122.1| mCG133388, isoform CRA ( 930) 4586 984.7 0 gi|62087496|dbj|BAD92195.1| protocadherin gamma su ( 895) 4581 983.6 0 gi|13876334|gb|AAK26087.1| protocadherin gamma A4 ( 930) 4579 983.2 0 gi|37999838|sp|Q9Y5G8.1|PCDG5_HUMAN Protocadherin ( 931) 4578 983.0 0 gi|37999841|sp|Q9Y5H1.1|PCDG2_HUMAN Protocadherin ( 932) 4578 983.0 0 gi|62510868|sp|Q5DRB5.1|PCDG5_PANTR Protocadherin ( 931) 4570 981.3 0 gi|119582334|gb|EAW61930.1| hCG1982215, isoform CR ( 931) 4539 974.7 0 gi|37999844|sp|Q9Y5H4.1|PCDG1_HUMAN Protocadherin ( 931) 4538 974.5 0 gi|37999843|sp|Q9Y5H3.1|PCDGA_HUMAN Protocadherin ( 936) 4528 972.4 0 gi|62510874|sp|Q5DRC1.1|PCDGA_PANTR Protocadherin ( 936) 4523 971.3 0 gi|62510875|sp|Q5DRC2.1|PCDG1_PANTR Protocadherin ( 931) 4521 970.9 0 gi|37999478|sp|O60330.1|PCDGC_HUMAN Protocadherin ( 932) 4520 970.7 0 gi|114602391|ref|XP_001149871.1| PREDICTED: simila ( 934) 4509 968.3 0 gi|62510872|sp|Q5DRB9.1|PCDGC_PANTR Protocadherin ( 932) 4503 967.1 0 gi|62510873|sp|Q5DRC0.1|PCDGB_PANTR Protocadherin ( 935) 4502 966.8 0 gi|37999842|sp|Q9Y5H2.1|PCDGB_HUMAN Protocadherin ( 935) 4497 965.8 0 gi|148678185|gb|EDL10132.1| mCG133388, isoform CRA ( 930) 4472 960.5 0 gi|13876324|gb|AAK26082.1| protocadherin gamma A10 ( 930) 4466 959.2 0 gi|50512398|gb|AAT77594.1| protocadherin gamma a2 ( 931) 4459 957.7 0 gi|13876330|gb|AAK26085.1| protocadherin gamma A2 ( 931) 4458 957.5 0 gi|13876332|gb|AAK26086.1| protocadherin gamma A3 ( 928) 4453 956.4 0 gi|50512402|gb|AAT77596.1| protocadherin gamma a3 ( 929) 4443 954.3 0 >>gi|62087936|dbj|BAD92415.1| protocadherin gamma subfam (950 aa) initn: 6171 init1: 6171 opt: 6171 Z-score: 7081.1 bits: 1321.6 E(): 0 Smith-Waterman score: 6171; 100.000% identity (100.000% similar) in 950 aa overlap (1-950:1-950) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 50 60 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 70 80 90 100 110 120 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 130 140 150 160 170 180 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 190 200 210 220 230 240 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 250 260 270 280 290 300 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 310 320 330 340 350 360 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 370 380 390 400 410 420 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 430 440 450 460 470 480 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 490 500 510 520 530 540 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 550 560 570 580 590 600 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL 610 620 630 640 650 660 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 670 680 690 700 710 720 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD 730 740 750 760 770 780 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ 790 800 810 820 830 840 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 850 860 870 880 890 900 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 910 920 930 940 950 >>gi|37999837|sp|Q9Y5G7.1|PCDG6_HUMAN Protocadherin gamm (932 aa) initn: 6035 init1: 6035 opt: 6035 Z-score: 6925.0 bits: 1292.7 E(): 0 Smith-Waterman score: 6035; 99.893% identity (99.893% similar) in 932 aa overlap (19-950:1-932) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::: gi|379 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|379 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ 770 780 790 800 810 820 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 830 840 850 860 870 880 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 890 900 910 920 930 >>gi|127138659|ref|NP_001076033.1| protocadherin gamma s (932 aa) initn: 6016 init1: 6016 opt: 6016 Z-score: 6903.1 bits: 1288.6 E(): 0 Smith-Waterman score: 6016; 99.356% identity (99.893% similar) in 932 aa overlap (19-950:1-932) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::: gi|127 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|127 SSIAQILVTVLDVNDNTPVFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|127 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|127 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ ::::::::::::::::::::::::::.:::::::::::::.::::::::::::::::::: gi|127 SRKSHLIFPQPNYADTLINQESYEKSDPLLITQDLLETKGDPRQLQQAPPNTDWRFSQAQ 770 780 790 800 810 820 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 830 840 850 860 870 880 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 890 900 910 920 930 >>gi|62510867|sp|Q5DRB4.1|PCDG6_PANTR Protocadherin gamm (932 aa) initn: 6012 init1: 6012 opt: 6012 Z-score: 6898.5 bits: 1287.8 E(): 0 Smith-Waterman score: 6012; 99.356% identity (99.893% similar) in 932 aa overlap (19-950:1-932) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::: gi|625 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|625 GMNSLQGFKLSGNSYFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|625 SSIAQILVTVLDVNDNTPVFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|625 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|625 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|625 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGDPRQLQQAPPNTDWRFSQAQ 770 780 790 800 810 820 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 830 840 850 860 870 880 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 890 900 910 920 930 >>gi|5457074|gb|AAD43773.1|AF152513_1 protocadherin gamm (818 aa) initn: 5193 init1: 5193 opt: 5198 Z-score: 5964.3 bits: 1114.7 E(): 0 Smith-Waterman score: 5198; 99.021% identity (99.388% similar) in 817 aa overlap (19-833:1-817) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::: gi|545 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|545 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|545 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQA--PPNTDWRFSQ :::::::::::::::::::::::::::::::::::::::::::::: . ::. . gi|545 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKREE 770 780 790 800 810 840 850 860 870 880 890 fj0029 AQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYG >>gi|114602357|ref|XP_001149666.1| PREDICTED: protocadhe (818 aa) initn: 5174 init1: 5174 opt: 5179 Z-score: 5942.5 bits: 1110.7 E(): 0 Smith-Waterman score: 5179; 98.409% identity (99.388% similar) in 817 aa overlap (19-833:1-817) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :::::::::::::::::::::::::::::::::::::::::: gi|114 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|114 SSIAQILVTVLDVNDNTPVFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|114 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|114 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQA--PPNTDWRFSQ ::::::::::::::::::::::::::.:::::::::::::.::::: . ::. . gi|114 SRKSHLIFPQPNYADTLINQESYEKSDPLLITQDLLETKGDPRQLQVSFFPPKREE 770 780 790 800 810 840 850 860 870 880 890 fj0029 AQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYG >>gi|109079006|ref|XP_001088343.1| PREDICTED: similar to (838 aa) initn: 4937 init1: 4937 opt: 4937 Z-score: 5664.3 bits: 1059.3 E(): 0 Smith-Waterman score: 4937; 93.560% identity (97.327% similar) in 823 aa overlap (4-826:4-826) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :.:::::::: ::::::: ::.: ::::::::::::::::::::::::::::::::: gi|109 MQPVFPLLNPREVSNKPVMAPLQRRPLRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG 10 20 30 40 50 60 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC ::::::.::: :::.:::::::::: ::: ::::::::.::::::::::::::::::::: gi|109 SFVGNIAKDLELEPRELAEHGVRIVFRGRTQLFSLNPRSGSLVTAGRIDREELCAQSPRC 70 80 90 100 110 120 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::::::::::::::::::::::::.:::::::::::::::::::::: ::::::: gi|109 LVSFNILVEDKLNLYPVEVEIVDINDNTPQFLKEELEVKILENAAPSSRFPLTEVYDPDV 130 140 150 160 170 180 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :.:::::::::::::::::::::.::::::::::::::::::::::.:::::.::::::: gi|109 GINSLQGFKLSGNSHFSVDVQSEGHGPKYPELVLEGTLDREGEAVYHLVLTALDGGDPVR 190 200 210 220 230 240 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ::::.:::::.:::::.:.:::::::::::::::::::::::.:::::::::::::: :: gi|109 SSVARILVTVVDVNDNAPVFTQPVYRVSVPENLPVGTPVLAVNATDQDEGVHGEVTYYFV 250 260 270 280 290 300 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND ::::::::::::::::::::::::::::.: :::::::::: :::::::::::::::::: gi|109 KITEKISQIFCLNVLTGEISTSANLDYEESRFYELGVEARDQPGLRDRAKVLITILDVND 310 320 330 340 350 360 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVSNYY 370 380 390 400 410 420 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|109 RLVTNAALDREEVSLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL 430 440 450 460 470 480 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY ::::::::::::::::::.::::.:::::::::::::::::::::::::::::.:::::: gi|109 ENNPRGASIFSVNALDPDMDQNARVSYSLAEDTLQGAPLSSYVSINSDTGILYTLRSFDY 490 500 510 520 530 540 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPAIPTDGSTGVELAPRSA 550 560 570 580 590 600 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL :::::::::::::::::::::::::::::::::::.::::::::: :::::::::::::: gi|109 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSL 610 620 630 640 650 660 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::: ::.::::::::::: ..::::::::::::.::: gi|109 VVAVQDHGQPPLSATVTLTVAVADSIPEILADLGSLEPSDGSHNSDLTLYLVVAVAVVSC 670 680 690 700 710 720 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD ::::::::::::::.:::::: ::: :::::::::::::::.:::::::::::::::::: gi|109 VFLAFVIVLLALRLRRWHKSRRLQALGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTAD 730 740 750 760 770 780 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ ::::::::::::::::::.::: :::: :: :::: ::::.::.:: gi|109 SRKSHLIFPQPNYADTLISQESCEKSESLLTTQDLPETKGDPRRLQVSFFPGGSGRVI 790 800 810 820 830 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ >>gi|148678196|gb|EDL10143.1| mCG133388, isoform CRA_z [ (932 aa) initn: 4864 init1: 4864 opt: 4864 Z-score: 5579.8 bits: 1043.8 E(): 0 Smith-Waterman score: 4864; 80.043% identity (92.704% similar) in 932 aa overlap (19-950:1-932) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :: ::.: : .:::.:: :::. :.:.:::::::.::: gi|148 MAALQRRPPCCELLLLLNLLWWLWGSEAGQLRYSIPEEVEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC ::::.:.:::::.:.::::.:.::.:::: :::::: :.:::::::::::::::::: : gi|148 SFVGSIAKDLGLQPRELAERGIRIISRGRSQLFSLNQRSGSLVTAGRIDREELCAQSAPC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::.:::::::::::::::::::.:::::::.:.::::::: ::.: ::.:::::: gi|148 LVSFNILIEDKLNLYPVEVEIVDINDNAPRFLKEEMELKILENAALSSHFLLMDVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :.::.:::::::.::::: :::. ::::::::::: .:::: :::..:::.::::::::: gi|148 GVNSIQGFKLSGSSHFSVHVQSQDHGPKYPELVLEHSLDREEEAVHHLVLVAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ...:.:::::.:::::.:.::::.::::::::::::: ::.:.:::::::::.:. :::: gi|148 TGMARILVTVVDVNDNAPVFTQPIYRVSVPENLPVGTRVLTVNATDQDEGVHAEIRYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND .:::.::.::::. .:::::::..::::.: :::: ::::: :::.:::::::::::.:: gi|148 RITEEISRIFCLDPFTGEISTSGTLDYENSRFYELDVEARDQPGLQDRAKVLITILDMND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :.::::::::::.:::.:::::.::::::.:.:: :::: ::: .::::.::.:. ::. gi|148 NAPEVVVTSGSRAIAENAPPGTIIALFQVYDKDSERNGLVICSISESLPFKLEESLDNYF 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL ::.::. ::::.: :::::::::.:::::::. .:::.::: :::::.: .::::::: gi|148 RLMTNTELDREQVSSYNITVTATDRGTPPLSTKIFISLDVADINDNPPVFSRSSYSVYVS 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY ::::.:.::::.::.::: ..::.. ::::..::::.::::..:::: ::.:::: :::: gi|148 ENNPKGVSIFSLNAVDPDSEENAEIIYSLAKETLQGTPLSSFLSINSITGVLYALCSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA ::.:.:.: ::::: : :::::::::.:::::::::.::::::.:::::::::::::::: gi|148 EQFRELNLLVTASDRGKPPLSSNVSLNLFVLDQNDNVPEILYPVLPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL :::::::::::::.::::::::::::.:::::::::::::::::: ::.::::::::::: gi|148 EPGYLVTKVVAVDKDSGQNAWLSYRLIKASEPGLFSVGLHTGEVRTARVLLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::. :::::::::::. : .::.::.:::::::.::: gi|148 VVAVQDHGQPPLSATVTLTVAVASSIPDILADLGSLDLPHKSEDSSLTIYLVVAVATVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD .:.:::. ::.::: .:::::::.:. :...: :::::..::.::::::::::::::: gi|148 IFFAFVMGLLVLRLWHWHKSRLLKATRKGVSNMSTSHFVGIDGVQAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ :::::::::::::: :::.::. ::.::::: .: : : ::::::::::::::: gi|148 SRKSHLIFPQPNYAHTLISQEGCEKNEPLLIQEDSAFCKEEDSLDQQAPPNTDWRFSQAQ 770 780 790 800 810 820 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 830 840 850 860 870 880 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 890 900 910 920 930 >>gi|13876338|gb|AAK26089.1| protocadherin gamma A6 [Mus (932 aa) initn: 4853 init1: 4853 opt: 4853 Z-score: 5567.2 bits: 1041.4 E(): 0 Smith-Waterman score: 4853; 80.150% identity (92.275% similar) in 932 aa overlap (19-950:1-932) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :: ::.: : .:::.:: :::. :.:.:::::::.::: gi|138 MAALQRRPPCCELLLLLNLLWWLWGSEAGQLRYSIPEEVEKG 10 20 30 40 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC ::::.:.:::::.:.::::.:.::.:::: :::::: :.:::::::::::::::::: : gi|138 SFVGSIAKDLGLQPRELAERGIRIISRGRSQLFSLNQRSGSLVTAGRIDREELCAQSAPC 50 60 70 80 90 100 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV :::::::.:::::::::::::::::::.:::::::.:.::::::: ::.: :: :::::: gi|138 LVSFNILIEDKLNLYPVEVEIVDINDNAPRFLKEEMELKILENAALSSHFLLMGVYDPDV 110 120 130 140 150 160 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :.::.:::::::.::::: :::. ::::::::::: .:::: :::..:::.::::::::: gi|138 GVNSIQGFKLSGSSHFSVHVQSQDHGPKYPELVLEHSLDREEEAVHHLVLVAMDGGDPVR 170 180 190 200 210 220 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ...:.:::::.:::::.:.::::.::::::::::::: ::.:.:::::::.:.:.::::: gi|138 TGMARILVTVVDVNDNAPVFTQPIYRVSVPENLPVGTRVLTVNATDQDEGIHAEITYSFV 230 240 250 260 270 280 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND .:::.:::::::: :::::::: .:::::: :::: ::::: :.:::::::::::.:: gi|138 RITEEISQIFCLNPLTGEISTSETLDYEDSRFYELDVEARDQSDLQDRAKVLITILDMND 290 300 310 320 330 340 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :.::::::::::.:::..: :::::::::.:.:: :::: ::: .::::.::.:. ::. gi|138 NAPEVVVTSGSRAIAENSPSGTVIALFQVYDKDSERNGLVICSISESLPFKLEESLDNYF 350 360 370 380 390 400 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL :::::. ::::.: :::::::::.:::::::. .:::.::: :::::.: .::::::: gi|138 RLVTNTELDREQVSSYNITVTATDRGTPPLSTKIFISLDVADINDNPPVFSRSSYSVYVS 410 420 430 440 450 460 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY ::::.:.::::.::.::: ..::.. ::::..::::.::::..:::: ::.:::: :::: gi|138 ENNPKGVSIFSLNAVDPDSEENAEIIYSLAKETLQGTPLSSFLSINSITGVLYALCSFDY 470 480 490 500 510 520 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA ::.:.:.: ::::: : :::::::::.:::::::::.::::::.:::::::::::::::: gi|138 EQFRELNLLVTASDRGKPPLSSNVSLNLFVLDQNDNVPEILYPVLPTDGSTGVELAPRSA 530 540 550 560 570 580 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL :::::::::::::.::::::::::::.::::::::::::::::.: ::.::::::::::: gi|138 EPGYLVTKVVAVDKDSGQNAWLSYRLIKASEPGLFSVGLHTGEIRTARVLLDRDALKQSL 590 600 610 620 630 640 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC :::::::::::::::::::::::. :::::::::::. : .::.::.:::::::.::: gi|138 VVAVQDHGQPPLSATVTLTVAVASSIPDILADLGSLDLPHKSEDSSLTIYLVVAVATVSC 650 660 670 680 690 700 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD .:.:::. ::.::: .:::::::.:. :...: :::::..::.::::::::::::::: gi|138 IFFAFVMGLLVLRLWHWHKSRLLKATRKGVSNMSTSHFVGIDGVQAFLQTYSHEVSLTAD 710 720 730 740 750 760 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ :::::::::::::: :::.::. ::.::::: .: : : ::::::::::::::: gi|138 SRKSHLIFPQPNYAHTLISQEGCEKNEPLLIQEDSAFCKEEDSLDQQAPPNTDWRFSQAQ 770 780 790 800 810 820 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|138 RPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ 830 840 850 860 870 880 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 890 900 910 920 930 >>gi|149017326|gb|EDL76377.1| rCG49295, isoform CRA_m [R (929 aa) initn: 4778 init1: 4778 opt: 4783 Z-score: 5486.8 bits: 1026.6 E(): 0 Smith-Waterman score: 4783; 79.614% identity (91.845% similar) in 932 aa overlap (19-950:1-929) 10 20 30 40 50 60 fj0029 CRSVLPLLNPREVPNKPVMAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKG :: ::. : .::..:: ::. :.::::::::::::: gi|149 MAALQRRRPCCELLLLFSLL---WGSEAGQIRYSIPEELEKG 10 20 30 70 80 90 100 110 120 fj0029 SFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC ::::.:.:::::.:.::::.::::::::: :::::: :.:::::::::::::::::: : gi|149 SFVGSIAKDLGLQPRELAERGVRIVSRGRSQLFSLNQRSGSLVTAGRIDREELCAQSAPC 40 50 60 70 80 90 130 140 150 160 170 180 fj0029 LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDV .::::::::::::::::::::::::::.:::::::.:..: ::::::::: :: :::::: gi|149 VVSFNILVEDKLNLYPVEVEIVDINDNAPRFLKEEMELRIPENAAPSSRFLLMGVYDPDV 100 110 120 130 140 150 190 200 210 220 230 240 fj0029 GMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVR :.::.:::::::.::::: :::. ::::::::::: .:::: :::..:::.::::::::: gi|149 GVNSIQGFKLSGSSHFSVHVQSQDHGPKYPELVLEHSLDREEEAVHHLVLVAMDGGDPVR 160 170 180 190 200 210 250 260 270 280 290 300 fj0029 SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFV ...:.:::::.:::::.:.::::.::::::::::.:: ::.:.:::::::.:...::::: gi|149 TGMARILVTVVDVNDNAPVFTQPIYRVSVPENLPLGTRVLTVNATDQDEGAHAQITYSFV 220 230 240 250 260 270 310 320 330 340 350 360 fj0029 KITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVND .:::.:.::: :. :::::::: ::::::: :::: ::::: :.:::::::::::::: gi|149 RITEEIAQIFRLDPLTGEISTSKNLDYEDSRFYELDVEARDQSDLQDRAKVLITILDVND 280 290 300 310 320 330 370 380 390 400 410 420 fj0029 NVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYY :.:::::::.::.:::.::::::::::::.:.:: :::: ::: .::::.::.:. ::. gi|149 NAPEVVVTSASRAIAENAPPGTVIALFQVYDKDSERNGLVICSISESLPFKLEESLDNYF 340 350 360 370 380 390 430 440 450 460 470 480 fj0029 RLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVL ::::: ::::.: :::::::::.:::::::. .:::.::: :::::.: .::::::: gi|149 RLVTNEELDREQVSSYNITVTATDRGTPPLSTKKFISLDVADINDNPPVFSRSSYSVYVP 400 410 420 430 440 450 490 500 510 520 530 540 fj0029 ENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDY ::::.:.::::.::.::: ..::.. ::::..::::.::::..::::.::.:::: :::: gi|149 ENNPKGVSIFSLNAVDPDSEENAEIIYSLAKETLQGTPLSSFLSINSNTGVLYALCSFDY 460 470 480 490 500 510 550 560 570 580 590 600 fj0029 EQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSA ::.:.:.: ::::: : :::::::::.:::::::::.::::::.:::::::::::::::: gi|149 EQFRELNLLVTASDRGKPPLSSNVSLNLFVLDQNDNVPEILYPVLPTDGSTGVELAPRSA 520 530 540 550 560 570 610 620 630 640 650 660 fj0029 EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRMARALLDRDALKQSL :::::::::::::.::::::::::::.:::::::::::::::::: ::.::::::::::: gi|149 EPGYLVTKVVAVDKDSGQNAWLSYRLIKASEPGLFSVGLHTGEVRTARVLLDRDALKQSL 580 590 600 610 620 630 670 680 690 700 710 720 fj0029 VVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSC ::.::::::::::::::::::.:. ::::::::.::. : .::.::.:::::::.::: gi|149 VVTVQDHGQPPLSATVTLTVAMASSIPDILADLSSLDLPHKSDDSSLTIYLVVAVATVSC 640 650 660 670 680 690 730 740 750 760 770 780 fj0029 VFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTAD ::.::: ::.::: .:.:: ::.:. :...: :::::..::.::::::::::::::: gi|149 VFFAFVTGLLVLRLWHWRKSSLLKATRKGVSNMSTSHFVGIDGVQAFLQTYSHEVSLTAD 700 710 720 730 740 750 790 800 810 820 830 840 fj0029 SRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQ :::::::::::::: :::.::. ::.::::: .: : : ::::::::::::::: gi|149 SRKSHLIFPQPNYAHTLISQEGCEKNEPLLIQEDSAFCKEEDSLDQQAPPNTDWRFSQAQ 760 770 780 790 800 810 850 860 870 880 890 900 fj0029 RPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQ :::::::::::.:::::::::::::::::::::::::::::::::::.:::::::::::: gi|149 RPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQ 820 830 840 850 860 870 910 920 930 940 950 fj0029 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 880 890 900 910 920 950 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 04:48:32 2008 done: Sun Aug 10 04:50:35 2008 Total Scan time: 1061.970 Total Display time: 0.530 Function used was FASTA [version 34.26.5 April 26, 2007]