hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-05582616/chunk_1/iprscan-20080810-05582616.nocrc
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Query sequence: fj01782
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00049.9.ls Insulin/IGF/Relaxin family                      95.8    1.2e-25   1
PF00049.9.fs Insulin/IGF/Relaxin family                      94.4    3.3e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00049.9.fs   1/1      82   140 ..     1   123 []    94.4  3.3e-25
PF00049.9.ls   1/1      82   140 ..     1   123 []    95.8  1.2e-25

Alignments of top-scoring domains:
PF00049.9.fs: domain 1 of 1, from 82 to 140: score 94.4, E = 3.3e-25
                   *->qhLCGshLVdaLylVCwgevkRSGffYtaPykprrevedplveqlel
                      ++LCG +LVdaL++VC g+  R Gf++++P + +             
     fj01782    82    ETLCGAELVDALQFVC-GD--R-GFYFNKP-TGY------------- 110  

                   avkspelqqqapAlkDSnlsfEeFKKlirNrqeAedgegaekylgadees
                                                                  ++s
     fj01782   111 ----------------------------------------------GSSS 114  

                   rkR.rkRGIVEqCChrpCsldqLesYC<-*
                   r R +++GIV++CC+r+C+l+ Le+YC   
     fj01782   115 R-RaPQTGIVDECCFRSCDLRRLEMYC    140  

PF00049.9.ls: domain 1 of 1, from 82 to 140: score 95.8, E = 1.2e-25
                   *->qhLCGshLVdaLylVCwgevkRSGffYtaPykprrevedplveqlel
                      ++LCG +LVdaL++VC g+  R Gf++++P + +             
     fj01782    82    ETLCGAELVDALQFVC-GD--R-GFYFNKP-TGY------------- 110  

                   avkspelqqqapAlkDSnlsfEeFKKlirNrqeAedgegaekylgadees
                                                                  ++s
     fj01782   111 ----------------------------------------------GSSS 114  

                   rkR.rkRGIVEqCChrpCsldqLesYC<-*
                   r R +++GIV++CC+r+C+l+ Le+YC   
     fj01782   115 R-RaPQTGIVDECCFRSCDLRRLEMYC    140  

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