# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj01818.fasta.nr -Q fj01818.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj01818, 248 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824009 sequences Expectation_n fit: rho(ln(x))= 5.6293+/-0.000191; mu= 7.0819+/- 0.011 mean_var=88.5569+/-17.075, 0's: 39 Z-trim: 43 B-trim: 469 in 1/66 Lambda= 0.136290 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087950|dbj|BAD92422.1| Transcription factor E ( 248) 1606 325.0 6e-87 gi|2494230|sp|Q15329|E2F5_HUMAN Transcription fact ( 346) 1592 322.4 5.3e-86 gi|758416|gb|AAC50120.1| E2F-5 gi|939729|gb|AA ( 345) 1575 319.0 5.3e-85 gi|1592738|emb|CAB01634.1| transcription factor E2 ( 346) 1575 319.0 5.3e-85 gi|109086835|ref|XP_001094919.1| PREDICTED: E2F tr ( 346) 1571 318.3 9.2e-85 gi|119607529|gb|EAW87123.1| E2F transcription fact ( 347) 1561 316.3 3.6e-84 gi|194037103|ref|XP_001924940.1| PREDICTED: simila ( 343) 1538 311.8 8.2e-83 gi|13096848|gb|AAH03220.1| E2F transcription facto ( 335) 1494 303.1 3.2e-80 gi|2494231|sp|Q61502|E2F5_MOUSE Transcription fact ( 335) 1494 303.1 3.2e-80 gi|2494232|sp|Q62814|E2F5_RAT Transcription factor ( 300) 1487 301.7 7.7e-80 gi|62643150|ref|XP_574892.1| PREDICTED: similar to ( 338) 1487 301.7 8.5e-80 gi|119906836|ref|XP_587085.3| PREDICTED: similar t ( 314) 1483 300.9 1.4e-79 gi|194214799|ref|XP_001490056.2| PREDICTED: simila ( 318) 1475 299.4 4.1e-79 gi|148673194|gb|EDL05141.1| E2F transcription fact ( 340) 1474 299.2 5e-79 gi|73999542|ref|XP_853833.1| PREDICTED: similar to ( 304) 1448 294.0 1.6e-77 gi|126321214|ref|XP_001376765.1| PREDICTED: simila ( 336) 1448 294.1 1.7e-77 gi|109466297|ref|XP_001053974.1| PREDICTED: simila ( 372) 1407 286.0 5e-75 gi|53136566|emb|CAG32612.1| hypothetical protein [ ( 364) 1246 254.4 1.6e-65 gi|183986332|gb|AAI66219.1| Unknown (protein for M ( 371) 1157 236.9 3.1e-60 gi|149438843|ref|XP_001517985.1| PREDICTED: simila ( 227) 1046 214.9 7.9e-54 gi|34785107|gb|AAH56832.1| E2F transcription facto ( 393) 1007 207.4 2.4e-51 gi|134142813|ref|NP_001077058.1| E2F transcription ( 185) 979 201.6 6.2e-50 gi|166796996|gb|AAI59090.1| Unknown (protein for M ( 374) 979 201.9 1.1e-49 gi|149038004|gb|EDL92364.1| rCG51568 [Rattus norve ( 412) 970 200.1 3.9e-49 gi|50414840|gb|AAH77333.1| E2f4-prov protein [Xeno ( 375) 968 199.7 4.8e-49 gi|112362028|gb|AAI19918.1| E2F transcription fact ( 404) 968 199.7 5.1e-49 gi|81914852|sp|Q8R0K9.1|E2F4_MOUSE Transcription f ( 410) 967 199.6 5.9e-49 gi|20071519|gb|AAH27048.1| E2F transcription facto ( 410) 967 199.6 5.9e-49 gi|73957515|ref|XP_853975.1| PREDICTED: similar to ( 409) 966 199.4 6.7e-49 gi|53133346|emb|CAG32002.1| hypothetical protein [ ( 414) 964 199.0 8.9e-49 gi|2494229|sp|Q16254|E2F4_HUMAN Transcription fact ( 413) 963 198.8 1e-48 gi|54696466|gb|AAV38605.1| E2F transcription facto ( 414) 963 198.8 1e-48 gi|802121|gb|AAB32597.1| E2F-4 [Homo sapiens] ( 416) 963 198.8 1e-48 gi|109128874|ref|XP_001088067.1| PREDICTED: simila ( 416) 963 198.8 1e-48 gi|114663112|ref|XP_511025.2| PREDICTED: similar t ( 426) 963 198.8 1e-48 gi|148725583|emb|CAN88713.1| novel protein similar ( 363) 919 190.1 3.7e-46 gi|194208699|ref|XP_001915795.1| PREDICTED: simila ( 402) 915 189.3 6.9e-46 gi|68533607|gb|AAH98598.1| Zgc:111879 protein [Dan ( 363) 913 188.9 8.4e-46 gi|115696783|ref|XP_799123.2| PREDICTED: similar t ( 356) 880 182.4 7.5e-44 gi|156214630|gb|EDO35612.1| predicted protein [Nem ( 335) 878 182.0 9.4e-44 gi|148673193|gb|EDL05140.1| E2F transcription fact ( 282) 863 179.0 6.3e-43 gi|47205885|emb|CAF93500.1| unnamed protein produc ( 379) 849 176.3 5.4e-42 gi|47221881|emb|CAF98893.1| unnamed protein produc ( 401) 849 176.3 5.6e-42 gi|70569337|dbj|BAE06393.1| transcription factor p ( 269) 791 164.8 1.1e-38 gi|119607528|gb|EAW87122.1| E2F transcription fact ( 172) 658 138.5 5.9e-31 gi|190581120|gb|EDV21198.1| hypothetical protein T ( 241) 654 137.8 1.3e-30 gi|56755387|gb|AAW25873.1| unknown [Schistosoma ja ( 288) 620 131.2 1.6e-28 gi|149048424|gb|EDM00965.1| rCG41614 [Rattus norve ( 141) 604 127.8 8e-28 gi|66505804|ref|XP_624285.1| PREDICTED: similar to ( 300) 607 128.7 9.4e-28 gi|149412671|ref|XP_001506812.1| PREDICTED: hypoth ( 384) 541 115.8 9.2e-24 >>gi|62087950|dbj|BAD92422.1| Transcription factor E2F5 (248 aa) initn: 1606 init1: 1606 opt: 1606 Z-score: 1716.1 bits: 325.0 E(): 6e-87 Smith-Waterman score: 1606; 100.000% identity (100.000% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTK 10 20 30 40 50 60 70 80 90 100 110 120 fj0181 EVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFNG 70 80 90 100 110 120 130 140 150 160 170 180 fj0181 DTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVP 130 140 150 160 170 180 190 200 210 220 230 240 fj0181 PPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIID 190 200 210 220 230 240 fj0181 ELMSSDGK :::::::: gi|620 ELMSSDGK >>gi|2494230|sp|Q15329|E2F5_HUMAN Transcription factor E (346 aa) initn: 1592 init1: 1592 opt: 1592 Z-score: 1699.2 bits: 322.4 E(): 5.3e-86 Smith-Waterman score: 1592; 100.000% identity (100.000% similar) in 246 aa overlap (1-246:65-310) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|249 PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL 100 110 120 130 140 150 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 160 170 180 190 200 210 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE 220 230 240 250 260 270 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK :::::::::::::::::::::::::::::::::::: gi|249 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 280 290 300 310 320 330 gi|249 VCDLFDVQILNY 340 >>gi|758416|gb|AAC50120.1| E2F-5 gi|939729|gb|AAB001 (345 aa) initn: 1494 init1: 1494 opt: 1575 Z-score: 1681.2 bits: 319.0 E(): 5.3e-85 Smith-Waterman score: 1575; 99.593% identity (99.593% similar) in 246 aa overlap (1-246:65-309) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|758 PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|758 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL 100 110 120 130 140 150 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|758 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 160 170 180 190 200 210 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|758 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE 220 230 240 250 260 270 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK :::::::::::::::::::: ::::::::::::::: gi|758 QHVSERSQALQQTSATDISS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 280 290 300 310 320 330 gi|758 VCDLFDVQILNY 340 >>gi|1592738|emb|CAB01634.1| transcription factor E2F5 [ (346 aa) initn: 1575 init1: 1575 opt: 1575 Z-score: 1681.2 bits: 319.0 E(): 5.3e-85 Smith-Waterman score: 1575; 99.593% identity (99.593% similar) in 246 aa overlap (1-246:65-310) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|159 PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|159 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLLL 100 110 120 130 140 150 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 160 170 180 190 200 210 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE 220 230 240 250 260 270 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK :::::::::::::::::::::::::::::::::::: gi|159 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 280 290 300 310 320 330 gi|159 VCDLFDVQILNY 340 >>gi|109086835|ref|XP_001094919.1| PREDICTED: E2F transc (346 aa) initn: 1571 init1: 1571 opt: 1571 Z-score: 1676.9 bits: 318.3 E(): 9.2e-85 Smith-Waterman score: 1571; 98.374% identity (100.000% similar) in 246 aa overlap (1-246:65-310) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|109 PPPPQQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL 100 110 120 130 140 150 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 160 170 180 190 200 210 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::::::.:::::::::.:::: gi|109 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPATPQKSSMATENLPE 220 230 240 250 260 270 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK ::::::::.:::::::.::::::::::::::::::: gi|109 QHVSERSQTLQQTSATEISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 280 290 300 310 320 330 gi|109 VCDLFDVQILNY 340 >>gi|119607529|gb|EAW87123.1| E2F transcription factor 5 (347 aa) initn: 827 init1: 827 opt: 1561 Z-score: 1666.3 bits: 316.3 E(): 3.6e-84 Smith-Waterman score: 1561; 98.790% identity (98.790% similar) in 248 aa overlap (1-246:65-311) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|119 PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL 100 110 120 130 140 150 100 110 120 130 140 fj0181 QQSIKNVMDDSINNR--FSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKK ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|119 QQSIKNVMDDSINNRYTFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKK 160 170 180 190 200 210 150 160 170 180 190 200 fj0181 YQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNL 220 230 240 250 260 270 210 220 230 240 fj0181 PEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK :::::::::::::::::::::: ::::::::::::::: gi|119 PEQHVSERSQALQQTSATDISS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDN 280 290 300 310 320 330 gi|119 EGVCDLFDVQILNY 340 >>gi|194037103|ref|XP_001924940.1| PREDICTED: similar to (343 aa) initn: 1457 init1: 1457 opt: 1538 Z-score: 1641.9 bits: 311.8 E(): 8.2e-83 Smith-Waterman score: 1538; 96.341% identity (97.967% similar) in 246 aa overlap (1-246:63-307) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::::::::::::::::::::::::::: gi|194 PPPQQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDI 40 50 60 70 80 90 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL 100 110 120 130 140 150 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 160 170 180 190 200 210 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE ::::::::::::::::::::::::::::::::::::::::: ::::::::. ::::::: gi|194 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQPSTPVTPQKSTTATQNLPE 220 230 240 250 260 270 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK ::.::::: ::::.:::.:: ::::::::::::::: gi|194 QHISERSQNLQQTAATDVSS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 280 290 300 310 320 330 gi|194 VCDLFDVQILNY 340 >>gi|13096848|gb|AAH03220.1| E2F transcription factor 5 (335 aa) initn: 1413 init1: 1413 opt: 1494 Z-score: 1595.3 bits: 303.1 E(): 3.2e-80 Smith-Waterman score: 1494; 93.902% identity (97.967% similar) in 246 aa overlap (1-246:55-299) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::.:::::::::::::::::::::::: gi|130 APSSQPSAALAGGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDI 30 40 50 60 70 80 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|130 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKERELDQQKLWL 90 100 110 120 130 140 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ ::::::::.:::::::::::::::::::.::::::::::::::::::::::::::::::: gi|130 QQSIKNVMEDSINNRFSYVTHEDICNCFHGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 150 160 170 180 190 200 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::: : ::::::.::.::::: gi|130 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSSTSVTPQKSTMAAQNLPE 210 220 230 240 250 260 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK ::::::::..::: :...:: ::::::::::::::: gi|130 QHVSERSQTFQQTPAAEVSS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 270 280 290 300 310 320 gi|130 VCDLFDVQILNY 330 >>gi|2494231|sp|Q61502|E2F5_MOUSE Transcription factor E (335 aa) initn: 1413 init1: 1413 opt: 1494 Z-score: 1595.3 bits: 303.1 E(): 3.2e-80 Smith-Waterman score: 1494; 93.902% identity (97.967% similar) in 246 aa overlap (1-246:55-299) 10 20 30 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDI :::::.:::::::::::::::::::::::: gi|249 APSSQPSRRSRGGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDI 30 40 50 60 70 80 40 50 60 70 80 90 fj0181 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWL ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|249 TNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKERELDQQKLWL 90 100 110 120 130 140 100 110 120 130 140 150 fj0181 QQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ ::::::::.:::::::::::::::::::.::::::::::::::::::::::::::::::: gi|249 QQSIKNVMEDSINNRFSYVTHEDICNCFHGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQ 150 160 170 180 190 200 160 170 180 190 200 210 fj0181 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPE :::::::::::::::::::::::::::::::::::::::::: : ::::::.::.::::: gi|249 INLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSSTSVTPQKSTMAAQNLPE 210 220 230 240 250 260 220 230 240 fj0181 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDGK ::::::::..::: :...:: ::::::::::::::: gi|249 QHVSERSQTFQQTPAAEVSS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG 270 280 290 300 310 320 gi|249 VCDLFDVQILNY 330 >>gi|2494232|sp|Q62814|E2F5_RAT Transcription factor E2F (300 aa) initn: 1406 init1: 1406 opt: 1487 Z-score: 1588.5 bits: 301.7 E(): 7.7e-80 Smith-Waterman score: 1487; 93.902% identity (97.154% similar) in 246 aa overlap (1-246:20-264) 10 20 30 40 fj0181 LLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIE :::::.::::::::::::::::::::::::::::::::::: gi|249 GGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIE 10 20 30 40 50 60 50 60 70 80 90 100 fj0181 KKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDS :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::.:: gi|249 KKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKERELDQQKLWLQQSIKNVMEDS 70 80 90 100 110 120 110 120 130 140 150 160 fj0181 INNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIH ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|249 INNRFSYVTHEDICSCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIH 130 140 150 160 170 180 170 180 190 200 210 220 fj0181 VLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQ ::::::::.:::::::::::::::::::::: : ::: ::.::.::::::::::::: .: gi|249 VLLINKESNSSKPVVFPVPPPDDLTQPSSQSSTSVTPPKSTMAAQNLPEQHVSERSQNFQ 190 200 210 220 230 240 230 240 fj0181 QTSATDISSAGSISGDIIDELMSSDGK :: ::.::: ::::::::::::::: gi|249 QTPATEISS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILN 250 260 270 280 290 248 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 06:02:28 2008 done: Sun Aug 10 06:05:14 2008 Total Scan time: 692.040 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]