hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-06173731/chunk_1/iprscan-20080810-06173731.nocrc
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Query sequence: fj02009
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       326.1    5.8e-95   1
PF00069.15.fs Protein kinase domain                       324.2    2.1e-94   1
PF07714.7.fs Protein tyrosine kinase                      52.1    4.9e-15   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      70   324 ..     1   287 []   324.2  2.1e-94
PF07714.7.fs   1/1      70   280 ..     1   234 [.    52.1  4.9e-15
PF00069.15.ls   1/1      70   324 ..     1   287 []   326.1  5.8e-95

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 70 to 324: score 324.2, E = 2.1e-94
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e++++lG GsfG+V + khk t++ +A+Ki++k+k  + k++++++
     fj02009    70    FERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTL 116  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E +il+ ++ p+ vrl ++f d+++ly+V+Ey++gG    + f++l+ 
     fj02009   117 N-EKRILQAVNFPFLVRLEYAFKDNSNLYMVMEYVPGG----EMFSHLR- 160  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     r g++  se +a+++a Qi+   eYLHs   i+RDLKPeN+L+d++g+
     fj02009   161 --RIGRF--SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGY 206  

                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
                   +     ++DFG+A     + +++++t++GTp+Y+APE++l ++gy ++vD
     fj02009   207 I----QVTDFGFA----KrVKGrTWTLCGTPEYLAPEIIL-SKGYNKAVD 247  

                   vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
                   +W+lGv++ye++ G+pPF  +      ++q+++ki +++++f+s  +   
     fj02009   248 WWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVRFPSHFS--- 289  

                   srsefrrlpnlseeakdLikkcLnkDPskRlt.....aeeilqHPwf<-*
                               +++kdL++++L++D +kR ++ +++  +i+ H+wf   
     fj02009   290 ------------SDLKDLLRNLLQVDLTKRFGnlkngVSDIKTHKWF    324  

PF07714.7.fs: domain 1 of 1, from 70 to 280: score 52.1, E = 4.9e-15
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                      ++  k+LG G+FG+V++ + k     te+  A K+L+k+ +      
     fj02009    70    FERKKTLGTGSFGRVMLVKHK----ATEQYYAMKILdKQ-KVVKLKQ 111  

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                    +e  l+E +i+    + p +VrL  +  +        ly+V+Ey++gG 
     fj02009   112 -IEHTLNEKRILQAV-NFPFLVRLEYAFKD-NSN----LYMVMEYVPGGE 154  

                   LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV
                   + ++Lr+    ++++ ++   +a+Qi    eYL+s  ++ RDL   N L+
     fj02009   155 MFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 201  

                   senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygkFts
                   ++++ + ++DFG a+ +       + ++ +       +APE +  + ++ 
     fj02009   202 DHQGYIQVTDFGFAKRV-------KGRTWTLcGTPEYLAPEIILSKGYNK 244  

                   kSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedG<-*
                   + D W+ GVl++E+   G +P +    + +++e++  +G   
     fj02009   245 AVDWWALGVLIYEMAA-GYPP-FFADQPIQIYEKI-VSG    280  

PF00069.15.ls: domain 1 of 1, from 70 to 324: score 326.1, E = 5.8e-95
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e++++lG GsfG+V + khk t++ +A+Ki++k+k  + k++++++
     fj02009    70    FERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTL 116  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E +il+ ++ p+ vrl ++f d+++ly+V+Ey++gG    + f++l+ 
     fj02009   117 N-EKRILQAVNFPFLVRLEYAFKDNSNLYMVMEYVPGG----EMFSHLR- 160  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     r g++  se +a+++a Qi+   eYLHs   i+RDLKPeN+L+d++g+
     fj02009   161 --RIGRF--SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGY 206  

                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
                   +     ++DFG+A     + +++++t++GTp+Y+APE++l ++gy ++vD
     fj02009   207 I----QVTDFGFA----KrVKGrTWTLCGTPEYLAPEIIL-SKGYNKAVD 247  

                   vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
                   +W+lGv++ye++ G+pPF  +      ++q+++ki +++++f+s  +   
     fj02009   248 WWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVRFPSHFS--- 289  

                   srsefrrlpnlseeakdLikkcLnkDPskRlt.....aeeilqHPwf<-*
                               +++kdL++++L++D +kR ++ +++  +i+ H+wf   
     fj02009   290 ------------SDLKDLLRNLLQVDLTKRFGnlkngVSDIKTHKWF    324  

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