# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj04323.fasta.nr -Q fj04323.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj04323, 543 aa vs /cdna2/lib/nr/nr library 3020366983 residues in 8842601 sequences statistics sampled from 60000 to 8830585 sequences Expectation_n fit: rho(ln(x))= 6.1642+/-0.00019; mu= 7.4581+/- 0.011 mean_var=101.4276+/-20.055, 0's: 33 Z-trim: 71 B-trim: 40 in 2/65 Lambda= 0.127349 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8842601) gi|119606755|gb|EAW86349.1| CUG triplet repeat, RN ( 509) 3219 601.9 1.6e-169 gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis ( 509) 3219 601.9 1.6e-169 gi|134152680|ref|NP_006552.3| CUG triplet repeat, ( 521) 3219 601.9 1.6e-169 gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus ( 532) 3219 601.9 1.6e-169 gi|123232602|emb|CAM18816.1| CUG triplet repeat, R ( 496) 3216 601.3 2.3e-169 gi|194388952|dbj|BAG61493.1| unnamed protein produ ( 514) 3216 601.3 2.3e-169 gi|189054263|dbj|BAG36783.1| unnamed protein produ ( 509) 3213 600.8 3.4e-169 gi|4249668|gb|AAD13761.1| apoptosis-related RNA bi ( 509) 3210 600.2 5e-169 gi|55733625|emb|CAH93489.1| hypothetical protein [ ( 514) 3206 599.5 8.4e-169 gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis- ( 490) 3181 594.9 1.9e-167 gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus ( 490) 3178 594.3 2.8e-167 gi|55731735|emb|CAH92572.1| hypothetical protein [ ( 490) 3172 593.2 6.1e-167 gi|1568643|gb|AAB09040.1| RNA-binding protein BRUN ( 490) 3172 593.2 6.1e-167 gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full= ( 508) 3165 592.0 1.5e-166 gi|194375526|dbj|BAG56708.1| unnamed protein produ ( 496) 3163 591.6 1.9e-166 gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full ( 513) 3163 591.6 2e-166 gi|134152710|ref|NP_001077055.1| CUG triplet repea ( 526) 3163 591.6 2e-166 gi|123232599|emb|CAM18813.1| CUG triplet repeat, R ( 526) 3163 591.6 2e-166 gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CU ( 508) 3162 591.4 2.2e-166 gi|74227938|dbj|BAE37963.1| unnamed protein produc ( 520) 3162 591.4 2.3e-166 gi|74209492|dbj|BAE23295.1| unnamed protein produc ( 524) 3162 591.4 2.3e-166 gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full= ( 536) 3159 590.9 3.4e-166 gi|74142177|dbj|BAE31857.1| unnamed protein produc ( 495) 3149 589.0 1.2e-165 gi|224092762|ref|XP_002190740.1| PREDICTED: CUG tr ( 507) 3140 587.4 3.7e-165 gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis ( 484) 3125 584.6 2.4e-164 gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma ( 488) 3125 584.6 2.4e-164 gi|55733179|emb|CAH93273.1| hypothetical protein [ ( 484) 3122 584.1 3.5e-164 gi|4249672|gb|AAD13763.1| apoptosis-related RNA bi ( 484) 3122 584.1 3.5e-164 gi|73949074|ref|XP_849139.1| PREDICTED: similar to ( 484) 3122 584.1 3.5e-164 gi|123232603|emb|CAM18817.1| CUG triplet repeat, R ( 488) 3122 584.1 3.6e-164 gi|194227176|ref|XP_001916706.1| PREDICTED: CUG tr ( 488) 3122 584.1 3.6e-164 gi|55661630|emb|CAH70231.1| CUG triplet repeat, RN ( 498) 3120 583.7 4.7e-164 gi|74198996|dbj|BAE30715.1| unnamed protein produc ( 488) 3111 582.0 1.4e-163 gi|55730095|emb|CAH91772.1| hypothetical protein [ ( 519) 3110 581.9 1.7e-163 gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full ( 484) 3095 579.1 1.1e-162 gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis] ( 538) 3095 579.1 1.2e-162 gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding p ( 488) 3094 578.9 1.3e-162 gi|3927998|emb|CAA77110.1| elav-type RNA-binding p ( 484) 2974 556.9 5.4e-156 gi|169145989|emb|CAH68907.2| CUG triplet repeat, R ( 492) 2937 550.1 6.1e-154 gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full= ( 514) 2937 550.1 6.3e-154 gi|19909954|dbj|BAB87828.1| elav-type ribonucleopr ( 486) 2906 544.4 3.1e-152 gi|126340400|ref|XP_001367508.1| PREDICTED: simila ( 511) 2769 519.2 1.2e-144 gi|149437035|ref|XP_001515840.1| PREDICTED: simila ( 528) 2709 508.2 2.6e-141 gi|224051049|ref|XP_002199924.1| PREDICTED: simila ( 484) 2582 484.8 2.6e-134 gi|60098733|emb|CAH65197.1| hypothetical protein [ ( 485) 2582 484.8 2.6e-134 gi|194380550|dbj|BAG58428.1| unnamed protein produ ( 403) 2579 484.2 3.3e-134 gi|119588314|gb|EAW67908.1| CUG triplet repeat, RN ( 514) 2572 483.0 9.7e-134 gi|148695568|gb|EDL27515.1| CUG triplet repeat, RN ( 499) 2571 482.8 1.1e-133 gi|149632715|ref|XP_001509363.1| PREDICTED: simila ( 513) 2571 482.8 1.1e-133 gi|73982386|ref|XP_533186.2| PREDICTED: similar to ( 513) 2570 482.7 1.2e-133 >>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA bi (509 aa) initn: 3219 init1: 3219 opt: 3219 Z-score: 3200.7 bits: 601.9 E(): 1.6e-169 Smith-Waterman score: 3219; 100.000% identity (100.000% similar) in 496 aa overlap (48-543:14-509) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP :::::::::::::::::::::::::::::: gi|119 MMVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 40 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 50 60 70 80 90 100 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 110 120 130 140 150 160 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 170 180 190 200 210 220 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 230 240 250 260 270 280 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 290 300 310 320 330 340 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 350 360 370 380 390 400 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL 410 420 430 440 450 460 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 470 480 490 500 >>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-rel (509 aa) initn: 3219 init1: 3219 opt: 3219 Z-score: 3200.7 bits: 601.9 E(): 1.6e-169 Smith-Waterman score: 3219; 100.000% identity (100.000% similar) in 496 aa overlap (48-543:14-509) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP :::::::::::::::::::::::::::::: gi|147 MXVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 40 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 50 60 70 80 90 100 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 110 120 130 140 150 160 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 170 180 190 200 210 220 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 230 240 250 260 270 280 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 290 300 310 320 330 340 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 350 360 370 380 390 400 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL 410 420 430 440 450 460 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|147 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 470 480 490 500 >>gi|134152680|ref|NP_006552.3| CUG triplet repeat, RNA (521 aa) initn: 3219 init1: 3219 opt: 3219 Z-score: 3200.6 bits: 601.9 E(): 1.6e-169 Smith-Waterman score: 3219; 100.000% identity (100.000% similar) in 496 aa overlap (48-543:26-521) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP :::::::::::::::::::::::::::::: gi|134 MTSAFKLDFLPDMMVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 40 50 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 60 70 80 90 100 110 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 120 130 140 150 160 170 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 180 190 200 210 220 230 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 240 250 260 270 280 290 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 300 310 320 330 340 350 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 360 370 380 390 400 410 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL 420 430 440 450 460 470 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|134 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 480 490 500 510 520 >>gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus nor (532 aa) initn: 3216 init1: 3216 opt: 3219 Z-score: 3200.4 bits: 601.9 E(): 1.6e-169 Smith-Waterman score: 3219; 96.132% identity (97.099% similar) in 517 aa overlap (27-543:16-532) 10 20 30 40 50 60 fj0432 RNTLHFKYQVFLAKIKVVFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDH .. : .. : ::::::::::::: gi|345 MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDH 10 20 30 40 70 80 90 100 110 120 fj0432 SDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 SDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFY 50 60 70 80 90 100 130 140 150 160 170 180 fj0432 TRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 TRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVM 110 120 130 140 150 160 190 200 210 220 230 240 fj0432 FSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 FSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFAD 170 180 190 200 210 220 250 260 270 280 290 300 fj0432 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQ 230 240 250 260 270 280 310 320 330 340 350 360 fj0432 MAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAA :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|345 MAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAA 290 300 310 320 330 340 370 380 390 400 410 420 fj0432 MNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 MNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQ 350 360 370 380 390 400 430 440 450 460 470 480 fj0432 AYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 AYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMP 410 420 430 440 450 460 490 500 510 520 530 540 fj0432 FGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 FGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDS 470 480 490 500 510 520 fj0432 KPY ::: gi|345 KPY 530 >>gi|123232602|emb|CAM18816.1| CUG triplet repeat, RNA b (496 aa) initn: 3216 init1: 3216 opt: 3216 Z-score: 3197.9 bits: 601.3 E(): 2.3e-169 Smith-Waterman score: 3216; 99.798% identity (100.000% similar) in 496 aa overlap (48-543:1-496) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP :::::::::::::::::::::::::::::: gi|123 NGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 40 50 60 70 80 90 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 100 110 120 130 140 150 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 160 170 180 190 200 210 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 220 230 240 250 260 270 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|123 AAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 280 290 300 310 320 330 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 340 350 360 370 380 390 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL 400 410 420 430 440 450 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|123 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 460 470 480 490 >>gi|194388952|dbj|BAG61493.1| unnamed protein product [ (514 aa) initn: 3214 init1: 3214 opt: 3216 Z-score: 3197.7 bits: 601.3 E(): 2.3e-169 Smith-Waterman score: 3216; 97.070% identity (97.656% similar) in 512 aa overlap (32-543:3-514) 10 20 30 40 50 60 fj0432 NTLHFKYQVFLAKIKVVFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHS : .. : :::::::::::::: gi|194 MRCPKSAVTMRNEELLLSNGTANKMNGALDHS 10 20 30 70 80 90 100 110 120 fj0432 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 40 50 60 70 80 90 130 140 150 160 170 180 fj0432 RKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMF 100 110 120 130 140 150 190 200 210 220 230 240 fj0432 SPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADT 160 170 180 190 200 210 250 260 270 280 290 300 fj0432 QKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 220 230 240 250 260 270 310 320 330 340 350 360 fj0432 AGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAM 280 290 300 310 320 330 370 380 390 400 410 420 fj0432 NSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQA ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|194 NSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGAMDALTQA 340 350 360 370 380 390 430 440 450 460 470 480 fj0432 YSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPF 400 410 420 430 440 450 490 500 510 520 530 540 fj0432 GNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK 460 470 480 490 500 510 fj0432 PY :: gi|194 PY >>gi|189054263|dbj|BAG36783.1| unnamed protein product [ (509 aa) initn: 3213 init1: 3213 opt: 3213 Z-score: 3194.8 bits: 600.8 E(): 3.4e-169 Smith-Waterman score: 3213; 99.798% identity (100.000% similar) in 496 aa overlap (48-543:14-509) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP .::::::::::::::::::::::::::::: gi|189 MTVEGRLLVPDRISGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 40 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 50 60 70 80 90 100 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 110 120 130 140 150 160 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 170 180 190 200 210 220 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 230 240 250 260 270 280 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 290 300 310 320 330 340 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 350 360 370 380 390 400 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL 410 420 430 440 450 460 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|189 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 470 480 490 500 >>gi|4249668|gb|AAD13761.1| apoptosis-related RNA bindin (509 aa) initn: 3210 init1: 3210 opt: 3210 Z-score: 3191.8 bits: 600.2 E(): 5e-169 Smith-Waterman score: 3210; 99.798% identity (99.798% similar) in 496 aa overlap (48-543:14-509) 20 30 40 50 60 70 fj0432 VFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIP :::::::::::::::::::::::::::::: gi|424 MTVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIP 10 20 30 40 80 90 100 110 120 130 fj0432 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 RSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKT 50 60 70 80 90 100 140 150 160 170 180 190 fj0432 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 LPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD 110 120 130 140 150 160 200 210 220 230 240 250 fj0432 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 GLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQ 170 180 190 200 210 220 260 270 280 290 300 310 fj0432 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAA 230 240 250 260 270 280 320 330 340 350 360 370 fj0432 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 AAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGAT 290 300 310 320 330 340 380 390 400 410 420 430 fj0432 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 VGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY 350 360 370 380 390 400 440 450 460 470 480 490 fj0432 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|424 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNL 410 420 430 440 450 460 500 510 520 530 540 fj0432 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::::::::: gi|424 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 470 480 490 500 >>gi|55733625|emb|CAH93489.1| hypothetical protein [Pong (514 aa) initn: 3204 init1: 3204 opt: 3206 Z-score: 3187.7 bits: 599.5 E(): 8.4e-169 Smith-Waterman score: 3206; 96.875% identity (97.461% similar) in 512 aa overlap (32-543:3-514) 10 20 30 40 50 60 fj0432 NTLHFKYQVFLAKIKVVFYRRHLRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHS : .. : :::::::::::::: gi|557 MRCPKSAVTMRNEELLLSNGTANKMNGALDHS 10 20 30 70 80 90 100 110 120 fj0432 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|557 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGCCFVTFYT 40 50 60 70 80 90 130 140 150 160 170 180 fj0432 RKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMF 100 110 120 130 140 150 190 200 210 220 230 240 fj0432 SPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADT ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SPFGQIEECWILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADT 160 170 180 190 200 210 250 260 270 280 290 300 fj0432 QKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 QKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 220 230 240 250 260 270 310 320 330 340 350 360 fj0432 AGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 AGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAM 280 290 300 310 320 330 370 380 390 400 410 420 fj0432 NSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQA 340 350 360 370 380 390 430 440 450 460 470 480 fj0432 YSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 YSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPF 400 410 420 430 440 450 490 500 510 520 530 540 fj0432 GNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK 460 470 480 490 500 510 fj0432 PY :: gi|557 PY >>gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-rela (490 aa) initn: 3181 init1: 3181 opt: 3181 Z-score: 3163.2 bits: 594.9 E(): 1.9e-167 Smith-Waterman score: 3181; 100.000% identity (100.000% similar) in 490 aa overlap (54-543:1-490) 30 40 50 60 70 80 fj0432 LRIIKRETCKRQHSCERVGAATCCNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEK :::::::::::::::::::::::::::::: gi|410 MNGALDHSDQPDPDAIKMFVGQIPRSWSEK 10 20 30 90 100 110 120 130 140 fj0432 ELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 ELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHH 40 50 60 70 80 90 150 160 170 180 190 200 fj0432 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGC 100 110 120 130 140 150 210 220 230 240 250 260 fj0432 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT 160 170 180 190 200 210 270 280 290 300 310 320 fj0432 ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQ 220 230 240 250 260 270 330 340 350 360 370 380 fj0432 TSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 TSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNI 280 290 300 310 320 330 390 400 410 420 430 440 fj0432 NALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 NALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQ 340 350 360 370 380 390 450 460 470 480 490 500 fj0432 QQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 QQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGF 400 410 420 430 440 450 510 520 530 540 fj0432 VSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY :::::::::::::::::::::::::::::::::::::::: gi|410 VSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 460 470 480 490 543 residues in 1 query sequences 3020366983 residues in 8842601 library sequences Tcomplib [34.26] (8 proc) start: Mon May 25 14:43:24 2009 done: Mon May 25 14:46:20 2009 Total Scan time: 1173.650 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]