# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj08031.fasta.nr -Q fj08031.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj08031, 278 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6804881 sequences Expectation_n fit: rho(ln(x))= 5.2047+/-0.000197; mu= 9.1584+/- 0.011 mean_var=95.3214+/-17.610, 0's: 52 Z-trim: 154 B-trim: 9 in 2/62 Lambda= 0.131365 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087996|dbj|BAD92445.1| splicing factor, argin ( 278) 1904 370.6 1.4e-100 gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA ( 276) 1781 347.3 1.5e-93 gi|90078208|dbj|BAE88784.1| unnamed protein produc ( 288) 1781 347.3 1.5e-93 gi|51703329|sp|P62997|TRA2B_RAT Splicing factor, a ( 288) 1781 347.3 1.5e-93 gi|119598613|gb|EAW78207.1| splicing factor, argin ( 289) 1781 347.3 1.5e-93 gi|74003542|ref|XP_535833.2| PREDICTED: similar to ( 471) 1781 347.6 2.1e-93 gi|189055016|dbj|BAG38000.1| unnamed protein produ ( 288) 1777 346.6 2.6e-93 gi|51476162|emb|CAH18071.1| hypothetical protein [ ( 276) 1775 346.2 3.2e-93 gi|126314442|ref|XP_001377181.1| PREDICTED: simila ( 298) 1775 346.2 3.4e-93 gi|149503171|ref|XP_001514404.1| PREDICTED: simila ( 362) 1769 345.2 8.6e-93 gi|55727979|emb|CAH90742.1| hypothetical protein [ ( 288) 1762 343.7 1.8e-92 gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 ( 289) 1747 340.9 1.3e-91 gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus] ( 288) 1719 335.6 5.2e-90 gi|49903569|gb|AAH77018.1| Splicing factor, argini ( 293) 1620 316.8 2.3e-84 gi|83318282|gb|AAI08874.1| LOC398448 protein [Xeno ( 298) 1582 309.6 3.5e-82 gi|27881815|gb|AAH44695.1| LOC398448 protein [Xeno ( 306) 1582 309.6 3.6e-82 gi|49258180|gb|AAH72952.1| LOC443599 protein [Xeno ( 304) 1560 305.5 6.4e-81 gi|109042322|ref|XP_001094519.1| PREDICTED: simila ( 268) 1552 303.9 1.7e-80 gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus mus ( 229) 1461 286.6 2.3e-75 gi|114590875|ref|XP_001151743.1| PREDICTED: simila ( 252) 1447 284.0 1.6e-74 gi|21758154|dbj|BAC05256.1| unnamed protein produc ( 252) 1443 283.2 2.6e-74 gi|4377849|gb|AAD19278.1| transformer-2-beta isofo ( 188) 1210 238.9 4.3e-61 gi|169145611|emb|CAQ15640.1| splicing factor, argi ( 278) 1208 238.7 7.2e-61 gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzia ( 283) 1195 236.3 4e-60 gi|29124601|gb|AAH49051.1| Splicing factor, argini ( 278) 1185 234.4 1.5e-59 gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzi ( 287) 1156 228.9 6.8e-58 gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzia ( 288) 1156 228.9 6.9e-58 gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzi ( 297) 1156 228.9 7e-58 gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzi ( 297) 1156 228.9 7e-58 gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzi ( 321) 1156 228.9 7.4e-58 gi|126342407|ref|XP_001375013.1| PREDICTED: simila ( 326) 1144 226.7 3.6e-57 gi|109069161|ref|XP_001083952.1| PREDICTED: simila ( 267) 1084 215.2 8.3e-54 gi|114612372|ref|XP_518996.2| PREDICTED: similar t ( 268) 1083 215.0 9.5e-54 gi|47229936|emb|CAG10350.1| unnamed protein produc ( 243) 1057 210.0 2.7e-52 gi|157889123|dbj|BAF81027.1| transformer-2 [Rana r ( 272) 1057 210.1 2.9e-52 gi|126341883|ref|XP_001369711.1| PREDICTED: simila ( 476) 1046 208.3 1.8e-51 gi|4033480|sp|Q13595|TRA2A_HUMAN Transformer-2 pro ( 282) 1043 207.5 1.9e-51 gi|194209723|ref|XP_001497961.2| PREDICTED: simila ( 279) 1041 207.1 2.4e-51 gi|53127932|emb|CAG31257.1| hypothetical protein [ ( 277) 1040 206.9 2.8e-51 gi|86821769|gb|AAI05490.1| Transformer-2 alpha [Bo ( 281) 1040 206.9 2.8e-51 gi|149641319|ref|XP_001513669.1| PREDICTED: simila ( 315) 1038 206.6 3.9e-51 gi|193245518|gb|ACF16977.1| TRA2A [Ovis aries] ( 281) 1037 206.3 4.2e-51 gi|115371739|gb|ABI96194.1| TRA2A [Sus scrofa] ( 279) 1031 205.2 9.1e-51 gi|148666184|gb|EDK98600.1| RIKEN cDNA G430041M01, ( 281) 1027 204.4 1.5e-50 gi|148666185|gb|EDK98601.1| RIKEN cDNA G430041M01, ( 270) 1022 203.5 2.9e-50 gi|171846642|gb|AAI61978.1| Tra2a protein [Rattus ( 282) 1022 203.5 3e-50 gi|148666187|gb|EDK98603.1| RIKEN cDNA G430041M01, ( 302) 1022 203.5 3.1e-50 gi|148666186|gb|EDK98602.1| RIKEN cDNA G430041M01, ( 300) 1013 201.8 1e-49 gi|51701959|sp|Q6PFR5|TRA2A_MOUSE Transformer-2 pr ( 281) 1011 201.4 1.3e-49 gi|49250512|gb|AAH74599.1| Transformer-2 alpha [Xe ( 287) 1006 200.5 2.5e-49 >>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/ (278 aa) initn: 1904 init1: 1904 opt: 1904 Z-score: 1960.8 bits: 370.6 E(): 1.4e-100 Smith-Waterman score: 1904; 100.000% identity (100.000% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR 10 20 30 40 50 60 70 80 90 100 110 120 fj0803 SRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER 70 80 90 100 110 120 130 140 150 160 170 180 fj0803 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 130 140 150 160 170 180 190 200 210 220 230 240 fj0803 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA 190 200 210 220 230 240 250 260 270 fj0803 AQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::::::::::::::::::::: gi|620 AQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA 250 260 270 >>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [ (276 aa) initn: 1781 init1: 1781 opt: 1781 Z-score: 1834.8 bits: 347.3 E(): 1.5e-93 Smith-Waterman score: 1781; 100.000% identity (100.000% similar) in 260 aa overlap (1-260:1-260) 10 20 30 40 50 60 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR 10 20 30 40 50 60 70 80 90 100 110 120 fj0803 SRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER 70 80 90 100 110 120 130 140 150 160 170 180 fj0803 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 130 140 150 160 170 180 190 200 210 220 230 240 fj0803 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA 190 200 210 220 230 240 250 260 270 fj0803 AQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::: gi|148 AQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY 250 260 270 >>gi|90078208|dbj|BAE88784.1| unnamed protein product [M (288 aa) initn: 1781 init1: 1781 opt: 1781 Z-score: 1834.6 bits: 347.3 E(): 1.5e-93 Smith-Waterman score: 1781; 100.000% identity (100.000% similar) in 260 aa overlap (1-260:13-272) 10 20 30 40 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS :::::::::::::::::::::::::::::::::::::::::::::::: gi|900 MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS 10 20 30 40 50 60 50 60 70 80 90 100 fj0803 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL 70 80 90 100 110 120 110 120 130 140 150 160 fj0803 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN 130 140 150 160 170 180 170 180 190 200 210 220 fj0803 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 190 200 210 220 230 240 230 240 250 260 270 fj0803 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::::::::::::::: gi|900 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGCRSRSRSRSYSPRRY 250 260 270 280 >>gi|51703329|sp|P62997|TRA2B_RAT Splicing factor, argin (288 aa) initn: 1781 init1: 1781 opt: 1781 Z-score: 1834.6 bits: 347.3 E(): 1.5e-93 Smith-Waterman score: 1781; 100.000% identity (100.000% similar) in 260 aa overlap (1-260:13-272) 10 20 30 40 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS :::::::::::::::::::::::::::::::::::::::::::::::: gi|517 MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS 10 20 30 40 50 60 50 60 70 80 90 100 fj0803 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL 70 80 90 100 110 120 110 120 130 140 150 160 fj0803 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN 130 140 150 160 170 180 170 180 190 200 210 220 fj0803 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 190 200 210 220 230 240 230 240 250 260 270 fj0803 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::::::::::::::: gi|517 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY 250 260 270 280 >>gi|119598613|gb|EAW78207.1| splicing factor, arginine/ (289 aa) initn: 1781 init1: 1781 opt: 1781 Z-score: 1834.6 bits: 347.3 E(): 1.5e-93 Smith-Waterman score: 1781; 100.000% identity (100.000% similar) in 260 aa overlap (1-260:13-272) 10 20 30 40 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS 10 20 30 40 50 60 50 60 70 80 90 100 fj0803 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL 70 80 90 100 110 120 110 120 130 140 150 160 fj0803 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN 130 140 150 160 170 180 170 180 190 200 210 220 fj0803 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 190 200 210 220 230 240 230 240 250 260 270 fj0803 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::::::::::::::: gi|119 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRKFL 250 260 270 280 >>gi|74003542|ref|XP_535833.2| PREDICTED: similar to spl (471 aa) initn: 1781 init1: 1781 opt: 1781 Z-score: 1832.0 bits: 347.6 E(): 2.1e-93 Smith-Waterman score: 1781; 100.000% identity (100.000% similar) in 260 aa overlap (1-260:196-455) 10 20 30 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKED :::::::::::::::::::::::::::::: gi|740 RGWQLRLKPVERRQQLGVMSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKED 170 180 190 200 210 220 40 50 60 70 80 90 fj0803 SRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMS 230 240 250 260 270 280 100 110 120 130 140 150 fj0803 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFA 290 300 310 320 330 340 160 170 180 190 200 210 fj0803 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYY 350 360 370 380 390 400 220 230 240 250 260 270 fj0803 DRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDH :::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 DRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRS 410 420 430 440 450 460 fj0803 THLVAIKA gi|740 YSPRRY 470 >>gi|189055016|dbj|BAG38000.1| unnamed protein product [ (288 aa) initn: 1777 init1: 1777 opt: 1777 Z-score: 1830.5 bits: 346.6 E(): 2.6e-93 Smith-Waterman score: 1777; 99.615% identity (100.000% similar) in 260 aa overlap (1-260:13-272) 10 20 30 40 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS :::::::::::::::::.:::::::::::::::::::::::::::::: gi|189 MSDSGEQNYGERESRSASRSGSAHGSGKSSRHTPARSRSKEDSRRSRSKSRSRSESRSRS 10 20 30 40 50 60 50 60 70 80 90 100 fj0803 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL 70 80 90 100 110 120 110 120 130 140 150 160 fj0803 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN 130 140 150 160 170 180 170 180 190 200 210 220 fj0803 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 190 200 210 220 230 240 230 240 250 260 270 fj0803 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::::::::::::::: gi|189 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY 250 260 270 280 >>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo (276 aa) initn: 1775 init1: 1775 opt: 1775 Z-score: 1828.7 bits: 346.2 E(): 3.2e-93 Smith-Waterman score: 1775; 99.615% identity (99.615% similar) in 260 aa overlap (1-260:1-260) 10 20 30 40 50 60 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSR 10 20 30 40 50 60 70 80 90 100 110 120 fj0803 SRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 SRSRPHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTER 70 80 90 100 110 120 130 140 150 160 170 180 fj0803 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 130 140 150 160 170 180 190 200 210 220 230 240 fj0803 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRA 190 200 210 220 230 240 250 260 270 fj0803 AQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::::::::::::::::: gi|514 AQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY 250 260 270 >>gi|126314442|ref|XP_001377181.1| PREDICTED: similar to (298 aa) initn: 1775 init1: 1775 opt: 1775 Z-score: 1828.3 bits: 346.2 E(): 3.4e-93 Smith-Waterman score: 1775; 99.615% identity (100.000% similar) in 260 aa overlap (1-260:24-283) 10 20 30 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSK ::::::::::::::::::::::::::::::::::::: gi|126 MASKQPRVATEQVFLEPLWKGKGESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSK 10 20 30 40 50 60 40 50 60 70 80 90 fj0803 SRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|126 SRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSREYRRRHSHSHSPMSTRRRHVG 70 80 90 100 110 120 100 110 120 130 140 150 fj0803 NRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENV 130 140 150 160 170 180 160 170 180 190 200 210 fj0803 DDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 DDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRG 190 200 210 220 230 240 220 230 240 250 260 270 fj0803 YDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIK ::::::::::::::::::::::::::::::::::::::::::: gi|126 YDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRK 250 260 270 280 290 fj0803 A >>gi|149503171|ref|XP_001514404.1| PREDICTED: similar to (362 aa) initn: 1613 init1: 1613 opt: 1769 Z-score: 1821.1 bits: 345.2 E(): 8.6e-93 Smith-Waterman score: 1769; 99.617% identity (99.617% similar) in 261 aa overlap (1-260:10-270) 10 20 30 40 50 fj0803 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MGPPNLENQESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRS 10 20 30 40 50 60 60 70 80 90 100 110 fj0803 SRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVF 70 80 90 100 110 120 120 130 140 150 160 170 fj0803 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 130 140 150 160 170 180 180 190 200 210 220 230 fj0803 LDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGG 190 200 210 220 230 240 240 250 260 270 fj0803 GGGGGG-WRAAQDRDQIYRRRSPSPYYSRGDTDHVPDLDHTHLVAIKA :::::: ::::::::::::::::::::::: gi|149 GGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRELTNSSGRFTVKDGGR 250 260 270 280 290 300 278 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 09:40:21 2008 done: Sun Aug 10 09:43:03 2008 Total Scan time: 708.670 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]